Analysis of interatomic Contacts of Structural Units in PDB entry:
9WA5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WA5 entry

There are 2 chains in PDB entry 9WA5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP -26SER 163
B
 VAL -27LYS 157
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 9WA5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 54Right-handed alpha
Helix 2
AA2
B
49 54Right-handed alpha
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There are 6 sheets in PDB entry 9WA5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 65first strand
Strand 2
A
58 60anti-parallel
Strand 3
A
-25 -19parallel
Strand 4
A
21 29anti-parallel
Strand 5
A
32 42anti-parallel
Strand 6
A
45 48anti-parallel
Strand 7
A
76 79anti-parallel
Strand 8
A
67 71anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 111first strand
Strand 2
A
95 99anti-parallel
Strand 3
A
138 140anti-parallel
Strand 4
A
146 149anti-parallel
Strand 5
A
153 154anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 118first strand
Strand 2
A
121 125anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
-25 -19first strand
Strand 2
B
21 29anti-parallel
Strand 3
B
32 42anti-parallel
Strand 4
B
45 48anti-parallel
Strand 5
B
76 79anti-parallel
Strand 6
B
67 71anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 60first strand
Strand 2
B
63 65anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
107 111first strand
Strand 2
B
95 99anti-parallel
Strand 3
B
138 140anti-parallel
Strand 4
B
146 149anti-parallel
Strand 5
B
153 155anti-parallel
Strand 6
B
121 125anti-parallel
Strand 7
B
114 118anti-parallel
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