Analysis of interatomic Contacts of Structural Units in PDB entry:
9WBW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WBW entry

There is 1 chain in PDB entry 9WBW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 19LEU 1749
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 81 helices in PDB entry 9WBW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 31Right-handed alpha
Helix 2
AA2
A
34 51Right-handed alpha
Helix 3
AA3
A
58 70Right-handed alpha
Helix 4
AA4
A
70 80Right-handed alpha
Helix 5
AA5
A
82 94Right-handed alpha
Helix 6
AA6
A
124 130Right-handed alpha
Helix 7
AA7
A
131 136Right-handed 310
Helix 8
AA8
A
183 206Right-handed alpha
Helix 9
AA9
A
214 218Right-handed 310
Helix 10
AB1
A
237 250Right-handed alpha
Helix 11
AB2
A
252 267Right-handed alpha
Helix 12
AB3
A
275 294Right-handed alpha
Helix 13
AB4
A
305 326Right-handed alpha
Helix 14
AB5
A
328 341Right-handed alpha
Helix 15
AB6
A
350 358Right-handed alpha
Helix 16
AB7
A
359 362Right-handed 310
Helix 17
AB8
A
363 378Right-handed alpha
Helix 18
AB9
A
381 395Right-handed alpha
Helix 19
AC1
A
395 406Right-handed alpha
Helix 20
AC2
A
409 417Right-handed 310
Helix 21
AC3
A
418 423Right-handed alpha
Helix 22
AC4
A
424 436Right-handed alpha
Helix 23
AC5
A
436 449Right-handed alpha
Helix 24
AC6
A
450 453Right-handed 310
Helix 25
AC7
A
465 472Right-handed alpha
Helix 26
AC8
A
472 483Right-handed alpha
Helix 27
AC9
A
491 513Right-handed alpha
Helix 28
AD1
A
532 554Right-handed alpha
Helix 29
AD2
A
556 575Right-handed alpha
Helix 30
AD3
A
576 578Right-handed 310
Helix 31
AD4
A
609 626Right-handed alpha
Helix 32
AD5
A
627 629Right-handed 310
Helix 33
AD6
A
630 635Right-handed alpha
Helix 34
AD7
A
636 641Right-handed alpha
Helix 35
AD8
A
641 661Right-handed alpha
Helix 36
AD9
A
664 667Right-handed 310
Helix 37
AE1
A
668 679Right-handed alpha
Helix 38
AE2
A
683 688Right-handed alpha
Helix 39
AE3
A
688 702Right-handed alpha
Helix 40
AE4
A
703 715Right-handed alpha
Helix 41
AE5
A
729 753Right-handed alpha
Helix 42
AE6
A
763 777Right-handed alpha
Helix 43
AE7
A
783 789Right-handed alpha
Helix 44
AE8
A
799 807Right-handed alpha
Helix 45
AE9
A
825 831Right-handed 310
Helix 46
AF1
A
839 857Right-handed alpha
Helix 47
AF2
A
872 883Right-handed 310
Helix 48
AF3
A
884 900Right-handed alpha
Helix 49
AF4
A
907 932Right-handed alpha
Helix 50
AF5
A
933 937Right-handed 310
Helix 51
AF6
A
940 946Right-handed alpha
Helix 52
AF7
A
954 963Right-handed alpha
Helix 53
AF8
A
964 970Right-handed 310
Helix 54
AF9
A
971 994Right-handed alpha
Helix 55
AG1
A
1165 1182Right-handed alpha
Helix 56
AG2
A
1189 1193Right-handed 310
Helix 57
AG3
A
1219 1228Right-handed alpha
Helix 58
AG4
A
1231 1249Right-handed alpha
Helix 59
AG5
A
1271 1277Right-handed 310
Helix 60
AG6
A
1287 1307Right-handed alpha
Helix 61
AG7
A
1316 1340Right-handed alpha
Helix 62
AG8
A
1348 1365Right-handed alpha
Helix 63
AG9
A
1370 1383Right-handed alpha
Helix 64
AH1
A
1396 1400Right-handed 310
Helix 65
AH2
A
1401 1413Right-handed alpha
Helix 66
AH3
A
1414 1418Right-handed 310
Helix 67
AH4
A
1427 1453Right-handed alpha
Helix 68
AH5
A
1467 1484Right-handed alpha
Helix 69
AH6
A
1493 1521Right-handed alpha
Helix 70
AH7
A
1525 1530Right-handed 310
Helix 71
AH8
A
1535 1544Right-handed alpha
Helix 72
AH9
A
1550 1557Right-handed alpha
Helix 73
AI1
A
1557 1570Right-handed alpha
Helix 74
AI2
A
1571 1580Right-handed alpha
Helix 75
AI3
A
1581 1584Right-handed 310
Helix 76
AI4
A
1600 1610Right-handed alpha
Helix 77
AI5
A
1651 1661Right-handed alpha
Helix 78
AI6
A
1699 1703Right-handed 310
Helix 79
AI7
A
1711 1724Right-handed alpha
Helix 80
AI8
A
1726 1738Right-handed alpha
Helix 81
AI9
A
1745 1749Right-handed 310
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There are 11 sheets in PDB entry 9WBW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 112first strand
Strand 2
A
138 143anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
268 274first strand
Strand 2
A
226 231anti-parallel
Strand 3
A
300 304anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
583 588first strand
Strand 2
A
591 596anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
781 782first strand
Strand 2
A
820 823anti-parallel
Strand 3
A
808 811anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1095 1097first strand
Strand 2
A
1104 1106anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1153 1164first strand
Strand 2
A
1114 1123anti-parallel
Strand 3
A
1206 1209anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1195 1196first strand
Strand 2
A
1203 1204anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1280 1282first strand
Strand 2
A
1424 1426anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1633 1636first strand
Strand 2
A
1623 1627anti-parallel
Strand 3
A
1665 1669anti-parallel
Strand 4
A
1674 1679anti-parallel
Strand 5
A
1683 1687anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1643 1645first strand
Strand 2
A
1648 1650anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1691 1692first strand
Strand 2
A
1709 1710anti-parallel
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