Analysis of interatomic Contacts of Structural Units in PDB entry:
9WBZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9WBZ entry

There are 14 chains in PDB entry 9WBZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 454	SER 1349
B	ALA 15	GLY 101
C	ALA 12	LYS 118
D	SER 32	ALA 124
E	ARG 40	ARG 134
F	ARG 17	GLY 102
G	ALA 12	LYS 119
H	SER 32	ALA 124
I	G -6	A 147
J	T 1	C 154
K	LYS 37	ARG 134
L	MET 1	PHE 375
N	GLY 1	PRO 427
O	VAL 6	THR 52

There are113 helices in PDB entry 9WBZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	454	516	Right-handed alpha
Helix 2	AA2	A	542	544	Right-handed 310
Helix 3	AA3	A	545	558	Right-handed alpha
Helix 4	AA4	A	732	736	Right-handed alpha
Helix 5	AA5	A	755	771	Right-handed alpha
Helix 6	AA6	A	784	799	Right-handed alpha
Helix 7	AA7	A	811	826	Right-handed alpha
Helix 8	AA8	A	837	844	Right-handed alpha
Helix 9	AA9	A	844	851	Right-handed alpha
Helix 10	AB1	A	859	866	Right-handed alpha
Helix 11	AB2	A	866	871	Right-handed alpha
Helix 12	AB3	A	883	888	Right-handed 310
Helix 13	AB4	A	891	901	Right-handed alpha
Helix 14	AB5	A	918	929	Right-handed alpha
Helix 15	AB6	A	935	939	Right-handed 310
Helix 16	AB7	A	962	973	Right-handed alpha
Helix 17	AB8	A	980	985	Right-handed alpha
Helix 18	AB9	A	1001	1015	Right-handed alpha
Helix 19	AC1	A	1037	1048	Right-handed alpha
Helix 20	AC2	A	1049	1053	Right-handed 310
Helix 21	AC3	A	1054	1064	Right-handed alpha
Helix 22	AC4	A	1072	1079	Right-handed alpha
Helix 23	AC5	A	1079	1095	Right-handed alpha
Helix 24	AC6	A	1105	1120	Right-handed alpha
Helix 25	AC7	A	1133	1144	Right-handed alpha
Helix 26	AC8	A	1156	1160	Right-handed alpha
Helix 27	AC9	A	1179	1188	Right-handed alpha
Helix 28	AD1	A	1209	1222	Right-handed alpha
Helix 29	AD2	A	1223	1229	Right-handed alpha
Helix 30	AD3	A	1241	1255	Right-handed alpha
Helix 31	AD4	A	1267	1274	Right-handed alpha
Helix 32	AD5	A	1276	1294	Right-handed alpha
Helix 33	AD6	A	1310	1316	Right-handed alpha
Helix 34	AD7	B	16	22	Right-handed alpha
Helix 35	AD8	B	24	29	Right-handed 310
Helix 36	AD9	B	30	42	Right-handed alpha
Helix 37	AE1	B	49	76	Right-handed alpha
Helix 38	AE2	B	82	93	Right-handed alpha
Helix 39	AE3	C	16	22	Right-handed alpha
Helix 40	AE4	C	26	37	Right-handed alpha
Helix 41	AE5	C	45	73	Right-handed alpha
Helix 42	AE6	C	79	90	Right-handed alpha
Helix 43	AE7	C	90	97	Right-handed alpha
Helix 44	AE8	D	37	49	Right-handed alpha
Helix 45	AE9	D	55	84	Right-handed alpha
Helix 46	AF1	D	90	102	Right-handed alpha
Helix 47	AF2	D	104	124	Right-handed alpha
Helix 48	AF3	E	44	57	Right-handed alpha
Helix 49	AF4	E	63	77	Right-handed alpha
Helix 50	AF5	E	85	114	Right-handed alpha
Helix 51	AF6	E	120	132	Right-handed alpha
Helix 52	AF7	F	25	29	Right-handed 310
Helix 53	AF8	F	30	41	Right-handed alpha
Helix 54	AF9	F	49	76	Right-handed alpha
Helix 55	AG1	F	82	93	Right-handed alpha
Helix 56	AG2	G	16	21	Right-handed alpha
Helix 57	AG3	G	26	37	Right-handed alpha
Helix 58	AG4	G	45	73	Right-handed alpha
Helix 59	AG5	G	79	89	Right-handed alpha
Helix 60	AG6	G	90	97	Right-handed alpha
Helix 61	AG7	H	37	49	Right-handed alpha
Helix 62	AG8	H	55	84	Right-handed alpha
Helix 63	AG9	H	90	102	Right-handed alpha
Helix 64	AH1	H	104	124	Right-handed alpha
Helix 65	AH2	K	44	49	Right-handed alpha
Helix 66	AH3	K	49	55	Right-handed alpha
Helix 67	AH4	K	63	79	Right-handed alpha
Helix 68	AH5	K	85	114	Right-handed alpha
Helix 69	AH6	K	120	132	Right-handed alpha
Helix 70	AH7	L	55	61	Right-handed alpha
Helix 71	AH8	L	62	65	Right-handed 310
Helix 72	AH9	L	78	92	Right-handed alpha
Helix 73	AI1	L	112	126	Right-handed alpha
Helix 74	AI2	L	137	145	Right-handed alpha
Helix 75	AI3	L	172	175	Right-handed 310
Helix 76	AI4	L	181	197	Right-handed alpha
Helix 77	AI5	L	202	216	Right-handed alpha
Helix 78	AI6	L	222	233	Right-handed alpha
Helix 79	AI7	L	252	260	Right-handed alpha
Helix 80	AI8	L	261	262	Right-handed 310
Helix 81	AI9	L	263	268	Right-handed 310
Helix 82	AJ1	L	273	284	Right-handed alpha
Helix 83	AJ2	L	286	296	Right-handed alpha
Helix 84	AJ3	L	301	306	Right-handed 310
Helix 85	AJ4	L	308	321	Right-handed alpha
Helix 86	AJ5	L	334	336	Right-handed 310
Helix 87	AJ6	L	337	349	Right-handed alpha
Helix 88	AJ7	L	350	355	Right-handed 310
Helix 89	AJ8	L	359	366	Right-handed alpha
Helix 90	AJ9	L	368	374	Right-handed alpha
Helix 91	AK1	N	69	74	Right-handed alpha
Helix 92	AK2	N	93	108	Right-handed alpha
Helix 93	AK3	N	112	116	Right-handed 310
Helix 94	AK4	N	127	141	Right-handed alpha
Helix 95	AK5	N	152	160	Right-handed alpha
Helix 96	AK6	N	187	190	Right-handed 310
Helix 97	AK7	N	196	212	Right-handed alpha
Helix 98	AK8	N	217	219	Right-handed 310
Helix 99	AK9	N	245	265	Right-handed alpha
Helix 100	AL1	N	273	280	Right-handed alpha
Helix 101	AL2	N	297	302	Right-handed alpha
Helix 102	AL3	N	303	308	Right-handed alpha
Helix 103	AL4	N	309	312	Right-handed 310
Helix 104	AL5	N	322	334	Right-handed alpha
Helix 105	AL6	N	338	345	Right-handed alpha
Helix 106	AL7	N	350	355	Right-handed 310
Helix 107	AL8	N	357	370	Right-handed alpha
Helix 108	AL9	N	383	389	Right-handed alpha
Helix 109	AM1	N	389	401	Right-handed alpha
Helix 110	AM2	N	402	408	Right-handed 310
Helix 111	AM3	N	411	418	Right-handed alpha
Helix 112	AM4	N	420	426	Right-handed alpha
Helix 113	AM5	O	10	22	Right-handed alpha

There are 27 sheets in PDB entry 9WBZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	776	777	first strand
Strand 2	A	906	909	parallel
Strand 3	A	878	881	parallel
Strand 4	A	807	809	parallel
Strand 5	A	855	858	parallel
Strand 6	A	831	833	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	992	996	first strand
Strand 2	A	1200	1204	parallel
Strand 3	A	1170	1173	parallel
Strand 4	A	1099	1103	parallel
Strand 5	A	1151	1155	parallel
Strand 6	A	1123	1126	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1017	1018	first strand
Strand 2	A	1032	1033	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	46	first strand
Strand 2	K	118	119	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	80	81	first strand
Strand 2	K	83	84	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	98	first strand
Strand 2	G	101	102	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	42	43	first strand
Strand 2	D	88	89	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	77	78	first strand
Strand 2	D	53	54	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	100	102	first strand
Strand 2	F	96	98	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	83	84	first strand
Strand 2	F	80	81	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	118	119	first strand
Strand 2	F	45	46	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	42	43	first strand
Strand 2	H	88	89	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	77	78	first strand
Strand 2	H	53	54	parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	29	32	first strand
Strand 2	L	16	21	anti-parallel
Strand 3	L	8	12	anti-parallel
Strand 4	L	103	107	parallel
Strand 5	L	131	136	parallel
Strand 6	L	357	358	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	35	36	first strand
Strand 2	L	53	54	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	71	72	first strand
Strand 2	L	75	76	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	169	170	first strand
Strand 2	L	160	166	anti-parallel
Strand 3	L	176	178	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	169	170	first strand
Strand 2	L	160	166	anti-parallel
Strand 3	L	150	155	anti-parallel
Strand 4	L	297	300	parallel
Strand 5	L	329	330	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	238	241	first strand
Strand 2	L	247	250	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	33	36	first strand
Strand 2	N	20	25	anti-parallel
Strand 3	N	12	16	anti-parallel
Strand 4	N	118	122	parallel
Strand 5	N	146	151	parallel
Strand 6	N	409	410	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	65	67	first strand
Strand 2	N	39	42	anti-parallel
Strand 3	N	80	83	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	86	87	first strand
Strand 2	N	90	91	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	184	185	first strand
Strand 2	N	175	181	anti-parallel
Strand 3	N	191	193	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	184	185	first strand
Strand 2	N	175	181	anti-parallel
Strand 3	N	164	170	anti-parallel
Strand 4	N	346	349	parallel
Strand 5	N	378	379	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	221	225	first strand
Strand 2	N	234	237	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	283	286	first strand
Strand 2	N	292	295	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	31	37	first strand
Strand 2	O	44	50	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9WBZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
9WBZ