Analysis of interatomic Contacts of Structural Units in PDB entry:
9WEW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9WEW entry

There are 5 chains in PDB entry 9WEW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 8	PRO 392
D	VAL 10	HIS 211
D	MET 213	SER 391
G	LYS 9	PRO 392
J	VAL 10	HIS 156

There are 64 helices in PDB entry 9WEW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	22	30	Right-handed alpha
Helix 2	AA2	A	30	35	Right-handed alpha
Helix 3	AA3	A	44	66	Right-handed alpha
Helix 4	AA4	A	69	71	Right-handed 310
Helix 5	AA5	A	78	94	Right-handed alpha
Helix 6	AA6	A	108	122	Right-handed alpha
Helix 7	AA7	A	137	145	Right-handed alpha
Helix 8	AA8	A	166	178	Right-handed alpha
Helix 9	AA9	A	197	202	Right-handed alpha
Helix 10	AB1	A	211	213	Right-handed 310
Helix 11	AB2	A	239	243	Right-handed 310
Helix 12	AB3	A	249	289	Right-handed alpha
Helix 13	AB4	A	315	325	Right-handed alpha
Helix 14	AB5	A	344	350	Right-handed alpha
Helix 15	AB6	A	352	357	Right-handed alpha
Helix 16	AB7	A	369	391	Right-handed alpha
Helix 17	AB8	D	22	30	Right-handed alpha
Helix 18	AB9	D	30	35	Right-handed alpha
Helix 19	AC1	D	44	66	Right-handed alpha
Helix 20	AC2	D	69	71	Right-handed 310
Helix 21	AC3	D	78	94	Right-handed alpha
Helix 22	AC4	D	108	122	Right-handed alpha
Helix 23	AC5	D	137	145	Right-handed alpha
Helix 24	AC6	D	166	178	Right-handed alpha
Helix 25	AC7	D	197	202	Right-handed alpha
Helix 26	AC8	D	211	213	Right-handed 310
Helix 27	AC9	D	238	243	Right-handed 310
Helix 28	AD1	D	249	289	Right-handed alpha
Helix 29	AD2	D	315	325	Right-handed alpha
Helix 30	AD3	D	344	350	Right-handed alpha
Helix 31	AD4	D	352	357	Right-handed alpha
Helix 32	AD5	D	369	391	Right-handed alpha
Helix 33	AD6	G	22	30	Right-handed alpha
Helix 34	AD7	G	30	35	Right-handed alpha
Helix 35	AD8	G	44	66	Right-handed alpha
Helix 36	AD9	G	69	71	Right-handed 310
Helix 37	AE1	G	78	94	Right-handed alpha
Helix 38	AE2	G	108	123	Right-handed alpha
Helix 39	AE3	G	137	145	Right-handed alpha
Helix 40	AE4	G	166	178	Right-handed alpha
Helix 41	AE5	G	197	202	Right-handed alpha
Helix 42	AE6	G	211	213	Right-handed 310
Helix 43	AE7	G	239	243	Right-handed 310
Helix 44	AE8	G	249	289	Right-handed alpha
Helix 45	AE9	G	315	325	Right-handed alpha
Helix 46	AF1	G	345	350	Right-handed alpha
Helix 47	AF2	G	352	357	Right-handed alpha
Helix 48	AF3	G	369	391	Right-handed alpha
Helix 49	AF4	J	22	30	Right-handed alpha
Helix 50	AF5	J	30	35	Right-handed alpha
Helix 51	AF6	J	44	66	Right-handed alpha
Helix 52	AF7	J	69	71	Right-handed 310
Helix 53	AF8	J	78	94	Right-handed alpha
Helix 54	AF9	J	108	121	Right-handed alpha
Helix 55	AG1	J	137	145	Right-handed alpha
Helix 56	AG2	J	166	178	Right-handed alpha
Helix 57	AG3	J	197	202	Right-handed alpha
Helix 58	AG4	J	211	213	Right-handed 310
Helix 59	AG5	J	239	243	Right-handed 310
Helix 60	AG6	J	249	289	Right-handed alpha
Helix 61	AG7	J	315	325	Right-handed alpha
Helix 62	AG8	J	345	350	Right-handed alpha
Helix 63	AG9	J	352	357	Right-handed alpha
Helix 64	AH1	J	369	391	Right-handed alpha

There are 12 sheets in PDB entry 9WEW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	11	12	first strand
Strand 2	A	327	328	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	73	76	first strand
Strand 2	A	220	224	anti-parallel
Strand 3	A	205	209	anti-parallel
Strand 4	A	182	186	parallel
Strand 5	A	149	153	parallel
Strand 6	A	100	104	parallel
Strand 7	A	124	128	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	292	294	first strand
Strand 2	A	305	310	anti-parallel
Strand 3	A	359	363	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	12	first strand
Strand 2	D	327	328	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	73	76	first strand
Strand 2	D	220	224	anti-parallel
Strand 3	D	205	209	anti-parallel
Strand 4	D	182	186	parallel
Strand 5	D	149	153	parallel
Strand 6	D	100	104	parallel
Strand 7	D	124	128	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	292	294	first strand
Strand 2	D	305	310	anti-parallel
Strand 3	D	359	363	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	11	12	first strand
Strand 2	G	327	328	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	73	76	first strand
Strand 2	G	220	224	anti-parallel
Strand 3	G	205	209	anti-parallel
Strand 4	G	182	186	parallel
Strand 5	G	149	153	parallel
Strand 6	G	100	104	parallel
Strand 7	G	124	128	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	292	294	first strand
Strand 2	G	305	310	anti-parallel
Strand 3	G	359	363	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	11	12	first strand
Strand 2	J	327	328	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	73	76	first strand
Strand 2	J	220	224	anti-parallel
Strand 3	J	205	209	anti-parallel
Strand 4	J	182	186	parallel
Strand 5	J	149	153	parallel
Strand 6	J	100	104	parallel
Strand 7	J	124	128	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	292	294	first strand
Strand 2	J	305	310	anti-parallel
Strand 3	J	359	363	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9WEW

Analysis of interatomic Contacts of Structural Units in PDB entry:
9WEW