Analysis of interatomic Contacts of Structural Units in PDB entry:
9WFG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WFG entry

There is 1 chain in PDB entry 9WFG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 85GLN 1334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 9WFG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
87 100Right-handed alpha
Helix 2
AA2
A
102 140Right-handed alpha
Helix 3
AA3
A
146 190Right-handed alpha
Helix 4
AA4
A
193 198Right-handed alpha
Helix 5
AA5
A
209 214Right-handed alpha
Helix 6
AA6
A
215 248Right-handed alpha
Helix 7
AA7
A
252 270Right-handed alpha
Helix 8
AA8
A
273 298Right-handed alpha
Helix 9
AA9
A
298 306Right-handed alpha
Helix 10
AB1
A
307 333Right-handed alpha
Helix 11
AB2
A
334 344Right-handed alpha
Helix 12
AB3
A
348 362Right-handed alpha
Helix 13
AB4
A
378 426Right-handed alpha
Helix 14
AB5
A
486 495Right-handed alpha
Helix 15
AB6
A
531 538Right-handed alpha
Helix 16
AB7
A
550 561Right-handed alpha
Helix 17
AB8
A
564 570Right-handed alpha
Helix 18
AB9
A
577 582Right-handed alpha
Helix 19
AC1
A
583 599Right-handed alpha
Helix 20
AC2
A
613 628Right-handed alpha
Helix 21
AC3
A
739 752Right-handed alpha
Helix 22
AC4
A
757 793Right-handed alpha
Helix 23
AC5
A
799 844Right-handed alpha
Helix 24
AC6
A
847 855Right-handed alpha
Helix 25
AC7
A
867 902Right-handed alpha
Helix 26
AC8
A
903 918Right-handed alpha
Helix 27
AC9
A
927 952Right-handed alpha
Helix 28
AD1
A
952 960Right-handed alpha
Helix 29
AD2
A
961 1000Right-handed alpha
Helix 30
AD3
A
1000 1016Right-handed alpha
Helix 31
AD4
A
1025 1044Right-handed alpha
Helix 32
AD5
A
1046 1069Right-handed alpha
Helix 33
AD6
A
1071 1077Right-handed alpha
Helix 34
AD7
A
1135 1144Right-handed alpha
Helix 35
AD8
A
1185 1190Right-handed alpha
Helix 36
AD9
A
1193 1202Right-handed alpha
Helix 37
AE1
A
1215 1229Right-handed alpha
Helix 38
AE2
A
1231 1238Right-handed alpha
Helix 39
AE3
A
1240 1244Right-handed 310
Helix 40
AE4
A
1247 1252Right-handed alpha
Helix 41
AE5
A
1253 1269Right-handed alpha
Helix 42
AE6
A
1283 1298Right-handed alpha
Helix 43
AE7
A
1307 1311Right-handed 310
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There are 4 sheets in PDB entry 9WFG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
470 471first strand
Strand 2
A
448 454anti-parallel
Strand 3
A
502 506anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
518 521first strand
Strand 2
A
602 606parallel
Strand 3
A
630 634parallel
Strand 4
A
477 480parallel
Strand 5
A
648 651parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1096 1105first strand
Strand 2
A
1111 1121anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1170 1173first strand
Strand 2
A
1272 1275parallel
Strand 3
A
1300 1303parallel
Strand 4
A
1126 1128parallel
Strand 5
A
1316 1318parallel
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