Analysis of interatomic Contacts of Structural Units in PDB entry:
9WFP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WFP entry

There is 1 chain in PDB entry 9WFP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 4MET 1474
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 78 helices in PDB entry 9WFP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 11Right-handed alpha
Helix 2
AA2
A
29 38Right-handed alpha
Helix 3
AA3
A
41 56Right-handed alpha
Helix 4
AA4
A
69 94Right-handed alpha
Helix 5
AA5
A
107 130Right-handed alpha
Helix 6
AA6
A
138 141Right-handed 310
Helix 7
AA7
A
142 163Right-handed alpha
Helix 8
AA8
A
169 192Right-handed alpha
Helix 9
AA9
A
226 230Right-handed 310
Helix 10
AB1
A
242 247Right-handed alpha
Helix 11
AB2
A
248 251Right-handed 310
Helix 12
AB3
A
267 272Right-handed alpha
Helix 13
AB4
A
272 278Right-handed alpha
Helix 14
AB5
A
291 298Right-handed alpha
Helix 15
AB6
A
302 307Right-handed alpha
Helix 16
AB7
A
308 316Right-handed alpha
Helix 17
AB8
A
317 332Right-handed alpha
Helix 18
AB9
A
337 352Right-handed alpha
Helix 19
AC1
A
360 364Right-handed 310
Helix 20
AC2
A
365 373Right-handed alpha
Helix 21
AC3
A
376 381Right-handed alpha
Helix 22
AC4
A
389 404Right-handed alpha
Helix 23
AC5
A
410 414Right-handed 310
Helix 24
AC6
A
422 431Right-handed alpha
Helix 25
AC7
A
434 439Right-handed alpha
Helix 26
AC8
A
441 453Right-handed alpha
Helix 27
AC9
A
454 485Right-handed alpha
Helix 28
AD1
A
487 493Right-handed alpha
Helix 29
AD2
A
496 513Right-handed alpha
Helix 30
AD3
A
515 520Right-handed alpha
Helix 31
AD4
A
520 529Right-handed alpha
Helix 32
AD5
A
531 546Right-handed alpha
Helix 33
AD6
A
552 557Right-handed alpha
Helix 34
AD7
A
557 568Right-handed alpha
Helix 35
AD8
A
568 594Right-handed alpha
Helix 36
AD9
A
658 663Right-handed alpha
Helix 37
AE1
A
695 700Right-handed alpha
Helix 38
AE2
A
705 716Right-handed alpha
Helix 39
AE3
A
717 723Right-handed alpha
Helix 40
AE4
A
744 757Right-handed alpha
Helix 41
AE5
A
765 769Right-handed 310
Helix 42
AE6
A
775 782Right-handed alpha
Helix 43
AE7
A
785 790Right-handed 310
Helix 44
AE8
A
798 803Right-handed alpha
Helix 45
AE9
A
822 827Right-handed alpha
Helix 46
AF1
A
829 837Right-handed alpha
Helix 47
AF2
A
904 916Right-handed alpha
Helix 48
AF3
A
918 946Right-handed alpha
Helix 49
AF4
A
955 978Right-handed alpha
Helix 50
AF5
A
981 1001Right-handed alpha
Helix 51
AF6
A
1004 1011Right-handed alpha
Helix 52
AF7
A
1012 1017Right-handed alpha
Helix 53
AF8
A
1017 1022Right-handed alpha
Helix 54
AF9
A
1025 1030Right-handed alpha
Helix 55
AG1
A
1030 1056Right-handed alpha
Helix 56
AG2
A
1056 1072Right-handed alpha
Helix 57
AG3
A
1074 1079Right-handed alpha
Helix 58
AG4
A
1084 1092Right-handed alpha
Helix 59
AG5
A
1092 1097Right-handed alpha
Helix 60
AG6
A
1098 1110Right-handed alpha
Helix 61
AG7
A
1111 1113Right-handed 310
Helix 62
AG8
A
1115 1120Right-handed alpha
Helix 63
AG9
A
1120 1125Right-handed alpha
Helix 64
AH1
A
1126 1129Right-handed 310
Helix 65
AH2
A
1130 1147Right-handed alpha
Helix 66
AH3
A
1152 1165Right-handed alpha
Helix 67
AH4
A
1172 1176Right-handed 310
Helix 68
AH5
A
1177 1187Right-handed alpha
Helix 69
AH6
A
1188 1192Right-handed 310
Helix 70
AH7
A
1196 1201Right-handed alpha
Helix 71
AH8
A
1202 1218Right-handed alpha
Helix 72
AH9
A
1283 1290Right-handed alpha
Helix 73
AI1
A
1311 1316Right-handed alpha
Helix 74
AI2
A
1344 1354Right-handed alpha
Helix 75
AI3
A
1357 1362Right-handed alpha
Helix 76
AI4
A
1380 1387Right-handed alpha
Helix 77
AI5
A
1388 1395Right-handed alpha
Helix 78
AI6
A
1412 1425Right-handed alpha
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There are 6 sheets in PDB entry 9WFP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
637 638first strand
Strand 2
A
615 616anti-parallel
Strand 3
A
674 675anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
644 645first strand
Strand 2
A
792 793parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
647 648first strand
Strand 2
A
808 812parallel
Strand 3
A
815 820anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
680 682first strand
Strand 2
A
760 762parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1242 1243first strand
Strand 2
A
1265 1266anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1401 1402first strand
Strand 2
A
1431 1432parallel
Strand 3
A
1272 1275parallel
Strand 4
A
1444 1449parallel
Strand 5
A
1454 1458anti-parallel
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