Analysis of interatomic Contacts of Structural Units in PDB entry:
9WFU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WFU entry

There is 1 chain in PDB entry 9WFU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 85GLN 1334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 9WFU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
87 100Right-handed alpha
Helix 2
AA2
A
105 139Right-handed alpha
Helix 3
AA3
A
144 150Right-handed alpha
Helix 4
AA4
A
152 191Right-handed alpha
Helix 5
AA5
A
193 201Right-handed alpha
Helix 6
AA6
A
209 214Right-handed alpha
Helix 7
AA7
A
215 248Right-handed alpha
Helix 8
AA8
A
250 269Right-handed alpha
Helix 9
AA9
A
273 298Right-handed alpha
Helix 10
AB1
A
298 306Right-handed alpha
Helix 11
AB2
A
307 333Right-handed alpha
Helix 12
AB3
A
334 345Right-handed alpha
Helix 13
AB4
A
347 355Right-handed alpha
Helix 14
AB5
A
356 361Right-handed alpha
Helix 15
AB6
A
378 426Right-handed alpha
Helix 16
AB7
A
487 495Right-handed alpha
Helix 17
AB8
A
531 538Right-handed alpha
Helix 18
AB9
A
550 561Right-handed alpha
Helix 19
AC1
A
563 567Right-handed 310
Helix 20
AC2
A
577 582Right-handed alpha
Helix 21
AC3
A
583 599Right-handed alpha
Helix 22
AC4
A
613 627Right-handed alpha
Helix 23
AC5
A
637 641Right-handed 310
Helix 24
AC6
A
682 698Right-handed alpha
Helix 25
AC7
A
739 752Right-handed alpha
Helix 26
AC8
A
757 766Right-handed alpha
Helix 27
AC9
A
770 793Right-handed alpha
Helix 28
AD1
A
799 812Right-handed alpha
Helix 29
AD2
A
816 843Right-handed alpha
Helix 30
AD3
A
847 854Right-handed alpha
Helix 31
AD4
A
861 866Right-handed alpha
Helix 32
AD5
A
867 903Right-handed alpha
Helix 33
AD6
A
904 925Right-handed alpha
Helix 34
AD7
A
927 952Right-handed alpha
Helix 35
AD8
A
952 960Right-handed alpha
Helix 36
AD9
A
961 992Right-handed alpha
Helix 37
AE1
A
994 999Right-handed alpha
Helix 38
AE2
A
1000 1016Right-handed alpha
Helix 39
AE3
A
1024 1068Right-handed alpha
Helix 40
AE4
A
1070 1077Right-handed alpha
Helix 41
AE5
A
1137 1144Right-handed alpha
Helix 42
AE6
A
1185 1190Right-handed alpha
Helix 43
AE7
A
1193 1205Right-handed alpha
Helix 44
AE8
A
1213 1229Right-handed alpha
Helix 45
AE9
A
1231 1238Right-handed alpha
Helix 46
AF1
A
1240 1244Right-handed 310
Helix 47
AF2
A
1253 1269Right-handed alpha
Helix 48
AF3
A
1283 1298Right-handed alpha
Helix 49
AF4
A
1307 1311Right-handed 310
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There are 6 sheets in PDB entry 9WFU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
467 472first strand
Strand 2
A
447 453anti-parallel
Strand 3
A
504 506anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
518 521first strand
Strand 2
A
602 606parallel
Strand 3
A
630 634parallel
Strand 4
A
477 480parallel
Strand 5
A
647 650parallel
Strand 6
A
656 659anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1119 1121first strand
Strand 2
A
1096 1100anti-parallel
Strand 3
A
1153 1155anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1102 1106first strand
Strand 2
A
1110 1116anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1170 1173first strand
Strand 2
A
1272 1275parallel
Strand 3
A
1300 1301parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1316 1320first strand
Strand 2
A
1327 1331anti-parallel
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