Analysis of interatomic Contacts of Structural Units in PDB entry:
9WGJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WGJ entry

There is 1 chain in PDB entry 9WGJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 7ILE 317
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 9WGJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 34Right-handed alpha
Helix 2
AA2
A
79 92Right-handed alpha
Helix 3
AA3
A
132 136Right-handed 310
Helix 4
AA4
A
165 176Right-handed alpha
Helix 5
AA5
A
228 242Right-handed alpha
Helix 6
AA6
A
254 256Right-handed 310
Helix 7
AA7
A
291 296Right-handed alpha
Helix 8
AA8
A
307 312Right-handed alpha
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There are 2 sheets in PDB entry 9WGJ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 42first strand
Strand 2
A
46 50anti-parallel
Strand 3
A
60 64anti-parallel
Strand 4
A
11 21parallel
Strand 5
A
69 77anti-parallel
Strand 6
A
119 123parallel
Strand 7
A
109 113anti-parallel
Strand 8
A
96 100anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 252first strand
Strand 2
A
258 264anti-parallel
Strand 3
A
270 276anti-parallel
Strand 4
A
219 225parallel
Strand 5
A
155 163anti-parallel
Strand 6
A
206 210parallel
Strand 7
A
192 198anti-parallel
Strand 8
A
180 186anti-parallel
Strand 9
A
288 290parallel
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