Analysis of interatomic Contacts of Structural Units in PDB entry:
9WHB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WHB entry

There are 3 chains in PDB entry 9WHB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2ASN 324
B
 ILE 7ASN 324
C
 LYS 2SER 325
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 9WHB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 24Right-handed alpha
Helix 2
AA2
A
34 45Right-handed alpha
Helix 3
AA3
A
83 90Right-handed alpha
Helix 4
AA4
A
101 118Right-handed alpha
Helix 5
AA5
A
119 129Right-handed alpha
Helix 6
AA6
A
153 163Right-handed alpha
Helix 7
AA7
A
164 167Right-handed 310
Helix 8
AA8
A
191 199Right-handed alpha
Helix 9
AA9
A
217 224Right-handed alpha
Helix 10
AB1
A
235 239Right-handed 310
Helix 11
AB2
A
240 250Right-handed alpha
Helix 12
AB3
A
270 275Right-handed 310
Helix 13
AB4
A
288 309Right-handed alpha
Helix 14
AB5
A
319 324Right-handed 310
Helix 15
AB6
B
19 24Right-handed alpha
Helix 16
AB7
B
39 47Right-handed alpha
Helix 17
AB8
B
83 90Right-handed alpha
Helix 18
AB9
B
101 118Right-handed alpha
Helix 19
AC1
B
119 129Right-handed alpha
Helix 20
AC2
B
153 163Right-handed alpha
Helix 21
AC3
B
164 167Right-handed 310
Helix 22
AC4
B
191 199Right-handed alpha
Helix 23
AC5
B
217 224Right-handed alpha
Helix 24
AC6
B
235 239Right-handed 310
Helix 25
AC7
B
240 250Right-handed alpha
Helix 26
AC8
B
270 275Right-handed 310
Helix 27
AC9
B
288 308Right-handed alpha
Helix 28
AD1
B
312 316Right-handed 310
Helix 29
AD2
B
318 323Right-handed alpha
Helix 30
AD3
C
13 23Right-handed alpha
Helix 31
AD4
C
35 47Right-handed alpha
Helix 32
AD5
C
83 90Right-handed alpha
Helix 33
AD6
C
97 119Right-handed alpha
Helix 34
AD7
C
119 129Right-handed alpha
Helix 35
AD8
C
153 163Right-handed alpha
Helix 36
AD9
C
164 167Right-handed 310
Helix 37
AE1
C
191 199Right-handed alpha
Helix 38
AE2
C
217 224Right-handed alpha
Helix 39
AE3
C
235 239Right-handed 310
Helix 40
AE4
C
240 250Right-handed alpha
Helix 41
AE5
C
270 275Right-handed 310
Helix 42
AE6
C
288 308Right-handed alpha
Helix 43
AE7
C
313 317Right-handed 310
Helix 44
AE8
C
319 325Right-handed alpha
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There are 6 sheets in PDB entry 9WHB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 29first strand
Strand 2
A
4 7parallel
Strand 3
A
49 52parallel
Strand 4
A
69 72parallel
Strand 5
A
94 95parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 188first strand
Strand 2
A
169 173parallel
Strand 3
A
146 150parallel
Strand 4
A
201 204parallel
Strand 5
A
229 232parallel
Strand 6
A
255 258parallel
Strand 7
A
278 280parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 31first strand
Strand 2
B
12 14parallel
Strand 3
B
51 54parallel
Strand 4
B
71 74parallel
Strand 5
B
94 95parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
186 188first strand
Strand 2
B
169 173parallel
Strand 3
B
146 150parallel
Strand 4
B
201 204parallel
Strand 5
B
229 232parallel
Strand 6
B
255 258parallel
Strand 7
B
278 280parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
26 28first strand
Strand 2
C
4 7parallel
Strand 3
C
50 53parallel
Strand 4
C
71 74parallel
Strand 5
C
94 95parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
186 188first strand
Strand 2
C
169 173parallel
Strand 3
C
146 150parallel
Strand 4
C
201 204parallel
Strand 5
C
229 232parallel
Strand 6
C
255 258parallel
Strand 7
C
278 280parallel
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