Analysis of interatomic Contacts of Structural Units in PDB entry:
9WHW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WHW entry

There are 2 chains in PDB entry 9WHW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLU 31LYS 372
A
 GLU 31LYS 371
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 9WHW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
31 38Right-handed alpha
Helix 2
AA2
B
42 62Right-handed alpha
Helix 3
AA3
B
65 81Right-handed alpha
Helix 4
AA4
B
93 99Right-handed 310
Helix 5
AA5
B
100 106Right-handed alpha
Helix 6
AA6
B
125 141Right-handed alpha
Helix 7
AA7
B
157 167Right-handed alpha
Helix 8
AA8
B
178 192Right-handed alpha
Helix 9
AA9
B
221 225Right-handed 310
Helix 10
AB1
B
227 237Right-handed alpha
Helix 11
AB2
B
268 273Right-handed alpha
Helix 12
AB3
B
282 287Right-handed 310
Helix 13
AB4
B
301 318Right-handed alpha
Helix 14
AB5
B
318 329Right-handed alpha
Helix 15
AB6
B
332 355Right-handed alpha
Helix 16
AB7
B
355 360Right-handed alpha
Helix 17
AB8
A
32 38Right-handed alpha
Helix 18
AB9
A
42 62Right-handed alpha
Helix 19
AC1
A
65 82Right-handed alpha
Helix 20
AC2
A
94 99Right-handed alpha
Helix 21
AC3
A
100 106Right-handed alpha
Helix 22
AC4
A
125 141Right-handed alpha
Helix 23
AC5
A
157 167Right-handed alpha
Helix 24
AC6
A
178 193Right-handed alpha
Helix 25
AC7
A
221 225Right-handed 310
Helix 26
AC8
A
227 237Right-handed alpha
Helix 27
AC9
A
268 273Right-handed alpha
Helix 28
AD1
A
282 287Right-handed 310
Helix 29
AD2
A
301 318Right-handed alpha
Helix 30
AD3
A
318 329Right-handed alpha
Helix 31
AD4
A
332 355Right-handed alpha
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There are 2 sheets in PDB entry 9WHW. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
197 201first strand
Strand 2
B
171 176parallel
Strand 3
B
148 152parallel
Strand 4
B
213 219parallel
Strand 5
B
239 252parallel
Strand 6
B
362 371anti-parallel
Strand 7
B
291 299anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
197 201first strand
Strand 2
A
171 176parallel
Strand 3
A
148 152parallel
Strand 4
A
213 219parallel
Strand 5
A
239 252parallel
Strand 6
A
362 370anti-parallel
Strand 7
A
292 299anti-parallel
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