Analysis of interatomic Contacts of Structural Units in PDB entry:
9WJW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WJW entry

There are 7 chains in PDB entry 9WJW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
F
 MET 1GLY 245
G
 GLU 3LEU 303
S
 MET 1GLY 245
T
 LYS 4LEU 303
A
 GLU 1HIS 50
Y
 MET 1GLY 246
Z
 ALA 2LEU 303
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 85 helices in PDB entry 9WJW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
F
2 23Right-handed alpha
Helix 2
AA2
F
29 41Right-handed alpha
Helix 3
AA3
F
44 58Right-handed alpha
Helix 4
AA4
F
73 86Right-handed alpha
Helix 5
AA5
F
92 101Right-handed alpha
Helix 6
AA6
F
103 118Right-handed alpha
Helix 7
AA7
F
118 132Right-handed alpha
Helix 8
AA8
F
133 161Right-handed alpha
Helix 9
AA9
F
178 186Right-handed alpha
Helix 10
AB1
F
189 201Right-handed alpha
Helix 11
AB2
F
206 216Right-handed alpha
Helix 12
AB3
F
223 243Right-handed alpha
Helix 13
AB4
G
8 19Right-handed alpha
Helix 14
AB5
G
20 22Right-handed 310
Helix 15
AB6
G
32 48Right-handed alpha
Helix 16
AB7
G
53 61Right-handed alpha
Helix 17
AB8
G
72 88Right-handed alpha
Helix 18
AB9
G
95 117Right-handed alpha
Helix 19
AC1
G
119 133Right-handed alpha
Helix 20
AC2
G
137 165Right-handed alpha
Helix 21
AC3
G
168 173Right-handed alpha
Helix 22
AC4
G
176 201Right-handed alpha
Helix 23
AC5
G
228 242Right-handed alpha
Helix 24
AC6
G
253 261Right-handed alpha
Helix 25
AC7
G
263 279Right-handed alpha
Helix 26
AC8
G
282 300Right-handed alpha
Helix 27
AC9
S
2 23Right-handed alpha
Helix 28
AD1
S
29 41Right-handed alpha
Helix 29
AD2
S
44 58Right-handed alpha
Helix 30
AD3
S
73 86Right-handed alpha
Helix 31
AD4
S
92 101Right-handed alpha
Helix 32
AD5
S
103 108Right-handed alpha
Helix 33
AD6
S
108 118Right-handed alpha
Helix 34
AD7
S
118 132Right-handed alpha
Helix 35
AD8
S
133 161Right-handed alpha
Helix 36
AD9
S
163 165Right-handed 310
Helix 37
AE1
S
166 171Right-handed alpha
Helix 38
AE2
S
178 186Right-handed alpha
Helix 39
AE3
S
189 201Right-handed alpha
Helix 40
AE4
S
206 216Right-handed alpha
Helix 41
AE5
S
223 245Right-handed alpha
Helix 42
AE6
T
8 19Right-handed alpha
Helix 43
AE7
T
20 22Right-handed 310
Helix 44
AE8
T
32 48Right-handed alpha
Helix 45
AE9
T
53 61Right-handed alpha
Helix 46
AF1
T
72 88Right-handed alpha
Helix 47
AF2
T
95 104Right-handed alpha
Helix 48
AF3
T
105 118Right-handed alpha
Helix 49
AF4
T
119 133Right-handed alpha
Helix 50
AF5
T
137 166Right-handed alpha
Helix 51
AF6
T
168 174Right-handed alpha
Helix 52
AF7
T
176 201Right-handed alpha
Helix 53
AF8
T
229 242Right-handed alpha
Helix 54
AF9
T
253 259Right-handed alpha
Helix 55
AG1
T
263 279Right-handed alpha
Helix 56
AG2
T
282 300Right-handed alpha
Helix 57
AG3
A
26 41Right-handed alpha
Helix 58
AG4
A
42 45Right-handed 310
Helix 59
AG5
Y
2 23Right-handed alpha
Helix 60
AG6
Y
29 41Right-handed alpha
Helix 61
AG7
Y
44 58Right-handed alpha
Helix 62
AG8
Y
73 86Right-handed alpha
Helix 63
AG9
Y
92 101Right-handed alpha
Helix 64
AH1
Y
103 118Right-handed alpha
Helix 65
AH2
Y
118 130Right-handed alpha
Helix 66
AH3
Y
133 160Right-handed alpha
Helix 67
AH4
Y
165 172Right-handed alpha
Helix 68
AH5
Y
177 187Right-handed alpha
Helix 69
AH6
Y
188 201Right-handed alpha
Helix 70
AH7
Y
206 216Right-handed alpha
Helix 71
AH8
Y
223 246Right-handed alpha
Helix 72
AH9
Z
8 19Right-handed alpha
Helix 73
AI1
Z
20 22Right-handed 310
Helix 74
AI2
Z
33 48Right-handed alpha
Helix 75
AI3
Z
53 61Right-handed alpha
Helix 76
AI4
Z
72 87Right-handed alpha
Helix 77
AI5
Z
95 117Right-handed alpha
Helix 78
AI6
Z
119 133Right-handed alpha
Helix 79
AI7
Z
137 165Right-handed alpha
Helix 80
AI8
Z
169 174Right-handed alpha
Helix 81
AI9
Z
176 201Right-handed alpha
Helix 82
AJ1
Z
229 242Right-handed alpha
Helix 83
AJ2
Z
253 261Right-handed alpha
Helix 84
AJ3
Z
263 279Right-handed alpha
Helix 85
AJ4
Z
282 300Right-handed alpha
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There are 4 sheets in PDB entry 9WJW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
208 213first strand
Strand 2
G
248 252anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
T
208 213first strand
Strand 2
T
248 252anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 6first strand
Strand 2
A
11 15anti-parallel
Strand 3
A
18 22anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Z
208 213first strand
Strand 2
Z
248 252anti-parallel
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