Analysis of interatomic Contacts of Structural Units in PDB entry:
9WLP

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9WLP entry

There are 6 chains in PDB entry 9WLP (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 58	MET 188
B	GLY 50	LEU 146
C	ILE 65	ASN 187
D	PRO 53	LEU 146
E	THR 60	ASN 187
F	PRO 53	LEU 146

There are 24 helices in PDB entry 9WLP. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	60	91	Right-handed alpha
Helix 2	AA2	A	141	155	Right-handed alpha
Helix 3	AA3	A	163	171	Right-handed alpha
Helix 4	AA4	A	180	188	Right-handed alpha
Helix 5	AA5	B	61	65	Right-handed 310
Helix 6	AA6	B	68	72	Right-handed 310
Helix 7	AA7	B	108	117	Right-handed alpha
Helix 8	AA8	B	135	146	Right-handed alpha
Helix 9	AA9	C	66	94	Right-handed alpha
Helix 10	AB1	C	141	155	Right-handed alpha
Helix 11	AB2	C	163	171	Right-handed alpha
Helix 12	AB3	C	180	187	Right-handed alpha
Helix 13	AB4	D	61	65	Right-handed 310
Helix 14	AB5	D	68	72	Right-handed 310
Helix 15	AB6	D	108	117	Right-handed alpha
Helix 16	AB7	D	135	146	Right-handed alpha
Helix 17	AB8	E	61	92	Right-handed alpha
Helix 18	AB9	E	141	155	Right-handed alpha
Helix 19	AC1	E	163	171	Right-handed alpha
Helix 20	AC2	E	180	187	Right-handed alpha
Helix 21	AC3	F	61	65	Right-handed 310
Helix 22	AC4	F	68	72	Right-handed 310
Helix 23	AC5	F	108	117	Right-handed alpha
Helix 24	AC6	F	135	146	Right-handed alpha

There are 12 sheets in PDB entry 9WLP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	101	104	first strand
Strand 2	A	108	114	anti-parallel
Strand 3	A	134	135	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	101	104	first strand
Strand 2	A	108	114	anti-parallel
Strand 3	A	121	124	anti-parallel
Strand 4	A	159	161	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	74	77	first strand
Strand 2	B	83	87	anti-parallel
Strand 3	B	90	95	anti-parallel
Strand 4	B	101	103	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	74	77	first strand
Strand 2	B	83	87	anti-parallel
Strand 3	B	90	95	anti-parallel
Strand 4	B	124	126	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	101	104	first strand
Strand 2	C	108	114	anti-parallel
Strand 3	C	134	135	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	101	104	first strand
Strand 2	C	108	114	anti-parallel
Strand 3	C	121	124	anti-parallel
Strand 4	C	159	161	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	74	77	first strand
Strand 2	D	83	87	anti-parallel
Strand 3	D	90	95	anti-parallel
Strand 4	D	101	103	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	74	77	first strand
Strand 2	D	83	87	anti-parallel
Strand 3	D	90	95	anti-parallel
Strand 4	D	125	126	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	101	104	first strand
Strand 2	E	108	114	anti-parallel
Strand 3	E	134	135	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	101	104	first strand
Strand 2	E	108	114	anti-parallel
Strand 3	E	121	124	anti-parallel
Strand 4	E	159	161	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	74	77	first strand
Strand 2	F	83	87	anti-parallel
Strand 3	F	90	96	anti-parallel
Strand 4	F	100	103	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	74	77	first strand
Strand 2	F	83	87	anti-parallel
Strand 3	F	90	96	anti-parallel
Strand 4	F	125	126	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9WLP

Analysis of interatomic Contacts of Structural Units in PDB entry:
9WLP