Analysis of interatomic Contacts of Structural Units in PDB entry:
9WM3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WM3 entry

There is 1 chain in PDB entry 9WM3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 686
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 9WM3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 14Right-handed 310
Helix 2
AA2
A
18 27Right-handed alpha
Helix 3
AA3
A
32 39Right-handed alpha
Helix 4
AA4
A
100 106Right-handed alpha
Helix 5
AA5
A
159 176Right-handed alpha
Helix 6
AA6
A
184 189Right-handed alpha
Helix 7
AA7
A
193 203Right-handed alpha
Helix 8
AA8
A
209 215Right-handed alpha
Helix 9
AA9
A
218 244Right-handed alpha
Helix 10
AB1
A
255 265Right-handed alpha
Helix 11
AB2
A
270 285Right-handed alpha
Helix 12
AB3
A
301 315Right-handed alpha
Helix 13
AB4
A
326 342Right-handed alpha
Helix 14
AB5
A
357 369Right-handed alpha
Helix 15
AB6
A
378 383Right-handed alpha
Helix 16
AB7
A
403 407Right-handed 310
Helix 17
AB8
A
432 439Right-handed alpha
Helix 18
AB9
A
467 481Right-handed alpha
Helix 19
AC1
A
496 515Right-handed alpha
Helix 20
AC2
A
528 541Right-handed alpha
Helix 21
AC3
A
551 555Right-handed 310
Helix 22
AC4
A
574 584Right-handed alpha
Helix 23
AC5
A
603 616Right-handed alpha
Helix 24
AC6
A
618 630Right-handed alpha
Helix 25
AC7
A
654 656Right-handed 310
Helix 26
AC8
A
657 672Right-handed alpha
Helix 27
AC9
A
672 684Right-handed alpha
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There are 4 sheets in PDB entry 9WM3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 45first strand
Strand 2
A
149 151anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 121first strand
Strand 2
A
126 129anti-parallel
Strand 3
A
91 96parallel
Strand 4
A
81 86anti-parallel
Strand 5
A
61 73anti-parallel
Strand 6
A
112 118anti-parallel
Strand 7
A
132 136anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 351first strand
Strand 2
A
374 377parallel
Strand 3
A
319 323parallel
Strand 4
A
391 397parallel
Strand 5
A
422 427parallel
Strand 6
A
291 296parallel
Strand 7
A
444 448parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
459 464first strand
Strand 2
A
593 598parallel
Strand 3
A
562 568parallel
Strand 4
A
485 489parallel
Strand 5
A
546 549parallel
Strand 6
A
520 523parallel
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