Analysis of interatomic Contacts of Structural Units in PDB entry:
9WNO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WNO entry

There are 2 chains in PDB entry 9WNO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 2PRO 408
B
 GLU 2ARG 408
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 9WNO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 31Right-handed alpha
Helix 2
AA2
A
37 52Right-handed alpha
Helix 3
AA3
A
55 59Right-handed 310
Helix 4
AA4
A
65 73Right-handed alpha
Helix 5
AA5
A
73 78Right-handed alpha
Helix 6
AA6
A
82 108Right-handed alpha
Helix 7
AA7
A
116 126Right-handed alpha
Helix 8
AA8
A
127 136Right-handed alpha
Helix 9
AA9
A
139 156Right-handed alpha
Helix 10
AB1
A
158 173Right-handed alpha
Helix 11
AB2
A
174 178Right-handed 310
Helix 12
AB3
A
179 193Right-handed alpha
Helix 13
AB4
A
197 237Right-handed alpha
Helix 14
AB5
A
237 242Right-handed alpha
Helix 15
AB6
A
252 262Right-handed alpha
Helix 16
AB7
A
266 270Right-handed 310
Helix 17
AB8
A
273 285Right-handed alpha
Helix 18
AB9
A
286 290Right-handed 310
Helix 19
AC1
A
293 311Right-handed alpha
Helix 20
AC2
A
320 325Right-handed alpha
Helix 21
AC3
A
326 332Right-handed alpha
Helix 22
AC4
A
337 366Right-handed alpha
Helix 23
AC5
A
373 400Right-handed alpha
Helix 24
AC6
B
14 21Right-handed 310
Helix 25
AC7
B
90 94Right-handed 310
Helix 26
AC8
B
117 121Right-handed 310
Helix 27
AC9
B
279 284Right-handed alpha
Helix 28
AD1
B
350 355Right-handed 310
Helix 29
AD2
B
380 404Right-handed alpha
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There are 6 sheets in PDB entry 9WNO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
97 99first strand
Strand 2
B
102 107anti-parallel
Strand 3
B
77 82anti-parallel
Strand 4
B
54 59anti-parallel
Strand 5
B
132 138anti-parallel
Strand 6
B
142 150anti-parallel
Strand 7
B
37 45anti-parallel
Strand 8
B
4 11anti-parallel
Strand 9
B
163 171parallel
Strand 10
B
179 187anti-parallel
Strand 11
B
199 205anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 24first strand
Strand 2
B
27 30anti-parallel
Strand 3
B
155 157anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
209 211first strand
Strand 2
B
359 365parallel
Strand 3
B
327 333anti-parallel
Strand 4
B
246 255anti-parallel
Strand 5
B
289 295anti-parallel
Strand 6
B
268 272anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
221 224first strand
Strand 2
B
232 235anti-parallel
Strand 3
B
302 305anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
258 259first strand
Strand 2
B
307 308anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
322 324first strand
Strand 2
B
369 371anti-parallel
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