Analysis of interatomic Contacts of Structural Units in PDB entry:
9WNS

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9WNS entry

There are 10 chains in PDB entry 9WNS (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	LYS 340
B	MET 1	HIS 343
C	MET 1	LYS 340
D	MET 1	GLY 342
E	MET 1	GLY 341
F	MET 1	GLY 342
G	SER 2	PRO 426
H	SER 2	LEU 425
K	GLN 118	ALA 304
L	LEU 284	ARG 300

There are133 helices in PDB entry 9WNS. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	22	32	Right-handed alpha
Helix 2	AA2	A	49	57	Right-handed alpha
Helix 3	AA3	A	63	68	Right-handed alpha
Helix 4	AA4	A	80	86	Right-handed alpha
Helix 5	AA5	A	105	114	Right-handed alpha
Helix 6	AA6	A	121	123	Right-handed 310
Helix 7	AA7	A	129	151	Right-handed alpha
Helix 8	AA8	A	178	192	Right-handed alpha
Helix 9	AA9	A	201	212	Right-handed alpha
Helix 10	AB1	A	221	232	Right-handed alpha
Helix 11	AB2	A	251	257	Right-handed alpha
Helix 12	AB3	A	295	299	Right-handed 310
Helix 13	AB4	A	300	318	Right-handed alpha
Helix 14	AB5	A	322	325	Right-handed 310
Helix 15	AB6	A	326	332	Right-handed alpha
Helix 16	AB7	A	335	339	Right-handed 310
Helix 17	AB8	B	22	31	Right-handed alpha
Helix 18	AB9	B	49	57	Right-handed alpha
Helix 19	AC1	B	62	69	Right-handed alpha
Helix 20	AC2	B	80	87	Right-handed alpha
Helix 21	AC3	B	98	102	Right-handed 310
Helix 22	AC4	B	103	113	Right-handed alpha
Helix 23	AC5	B	129	151	Right-handed alpha
Helix 24	AC6	B	178	191	Right-handed alpha
Helix 25	AC7	B	201	212	Right-handed alpha
Helix 26	AC8	B	221	232	Right-handed alpha
Helix 27	AC9	B	251	257	Right-handed alpha
Helix 28	AD1	B	295	299	Right-handed 310
Helix 29	AD2	B	300	317	Right-handed alpha
Helix 30	AD3	B	322	325	Right-handed 310
Helix 31	AD4	B	326	332	Right-handed alpha
Helix 32	AD5	C	22	32	Right-handed alpha
Helix 33	AD6	C	49	56	Right-handed alpha
Helix 34	AD7	C	62	69	Right-handed alpha
Helix 35	AD8	C	80	85	Right-handed alpha
Helix 36	AD9	C	107	113	Right-handed alpha
Helix 37	AE1	C	129	152	Right-handed alpha
Helix 38	AE2	C	178	191	Right-handed alpha
Helix 39	AE3	C	201	212	Right-handed alpha
Helix 40	AE4	C	221	232	Right-handed alpha
Helix 41	AE5	C	251	257	Right-handed alpha
Helix 42	AE6	C	268	272	Right-handed 310
Helix 43	AE7	C	295	300	Right-handed 310
Helix 44	AE8	C	302	311	Right-handed alpha
Helix 45	AE9	C	312	317	Right-handed alpha
Helix 46	AF1	C	322	325	Right-handed 310
Helix 47	AF2	C	326	332	Right-handed alpha
Helix 48	AF3	C	335	339	Right-handed 310
Helix 49	AF4	D	22	32	Right-handed alpha
Helix 50	AF5	D	49	57	Right-handed alpha
Helix 51	AF6	D	63	67	Right-handed 310
Helix 52	AF7	D	80	87	Right-handed alpha
Helix 53	AF8	D	105	114	Right-handed alpha
Helix 54	AF9	D	129	151	Right-handed alpha
Helix 55	AG1	D	178	191	Right-handed alpha
Helix 56	AG2	D	201	212	Right-handed alpha
Helix 57	AG3	D	221	232	Right-handed alpha
Helix 58	AG4	D	251	256	Right-handed alpha
Helix 59	AG5	D	295	299	Right-handed 310
Helix 60	AG6	D	300	317	Right-handed alpha
Helix 61	AG7	D	322	325	Right-handed 310
Helix 62	AG8	D	326	332	Right-handed alpha
Helix 63	AG9	E	22	32	Right-handed alpha
Helix 64	AH1	E	43	47	Right-handed 310
Helix 65	AH2	E	49	56	Right-handed alpha
Helix 66	AH3	E	80	86	Right-handed alpha
Helix 67	AH4	E	105	113	Right-handed alpha
Helix 68	AH5	E	129	151	Right-handed alpha
Helix 69	AH6	E	178	191	Right-handed alpha
Helix 70	AH7	E	201	212	Right-handed alpha
Helix 71	AH8	E	221	232	Right-handed alpha
Helix 72	AH9	E	251	256	Right-handed alpha
Helix 73	AI1	E	295	299	Right-handed 310
Helix 74	AI2	E	300	317	Right-handed alpha
Helix 75	AI3	E	322	325	Right-handed 310
Helix 76	AI4	E	326	333	Right-handed alpha
Helix 77	AI5	F	22	31	Right-handed alpha
Helix 78	AI6	F	49	57	Right-handed alpha
Helix 79	AI7	F	62	69	Right-handed alpha
Helix 80	AI8	F	80	86	Right-handed alpha
Helix 81	AI9	F	105	113	Right-handed alpha
Helix 82	AJ1	F	129	152	Right-handed alpha
Helix 83	AJ2	F	178	191	Right-handed alpha
Helix 84	AJ3	F	201	212	Right-handed alpha
Helix 85	AJ4	F	221	232	Right-handed alpha
Helix 86	AJ5	F	254	258	Right-handed 310
Helix 87	AJ6	F	295	299	Right-handed 310
Helix 88	AJ7	F	300	317	Right-handed alpha
Helix 89	AJ8	F	322	325	Right-handed 310
Helix 90	AJ9	F	326	332	Right-handed alpha
Helix 91	AK1	G	9	15	Right-handed alpha
Helix 92	AK2	G	27	31	Right-handed 310
Helix 93	AK3	G	32	41	Right-handed alpha
Helix 94	AK4	G	64	68	Right-handed 310
Helix 95	AK5	G	82	89	Right-handed alpha
Helix 96	AK6	G	97	101	Right-handed 310
Helix 97	AK7	G	102	107	Right-handed alpha
Helix 98	AK8	G	136	142	Right-handed alpha
Helix 99	AK9	G	167	169	Right-handed 310
Helix 100	AL1	G	188	200	Right-handed alpha
Helix 101	AL2	G	214	222	Right-handed alpha
Helix 102	AL3	G	237	246	Right-handed alpha
Helix 103	AL4	G	269	276	Right-handed alpha
Helix 104	AL5	G	286	291	Right-handed alpha
Helix 105	AL6	G	292	297	Right-handed alpha
Helix 106	AL7	G	332	342	Right-handed alpha
Helix 107	AL8	G	395	407	Right-handed alpha
Helix 108	AL9	G	408	420	Right-handed alpha
Helix 109	AM1	H	9	14	Right-handed alpha
Helix 110	AM2	H	15	17	Right-handed 310
Helix 111	AM3	H	27	31	Right-handed 310
Helix 112	AM4	H	32	41	Right-handed alpha
Helix 113	AM5	H	64	68	Right-handed 310
Helix 114	AM6	H	81	89	Right-handed alpha
Helix 115	AM7	H	97	101	Right-handed 310
Helix 116	AM8	H	102	107	Right-handed alpha
Helix 117	AM9	H	136	144	Right-handed alpha
Helix 118	AN1	H	167	169	Right-handed 310
Helix 119	AN2	H	188	199	Right-handed alpha
Helix 120	AN3	H	200	202	Right-handed 310
Helix 121	AN4	H	213	223	Right-handed alpha
Helix 122	AN5	H	237	246	Right-handed alpha
Helix 123	AN6	H	269	277	Right-handed alpha
Helix 124	AN7	H	286	291	Right-handed alpha
Helix 125	AN8	H	292	297	Right-handed alpha
Helix 126	AN9	H	332	343	Right-handed alpha
Helix 127	AO1	H	395	405	Right-handed alpha
Helix 128	AO2	H	408	413	Right-handed alpha
Helix 129	AO3	H	413	423	Right-handed alpha
Helix 130	AO4	K	269	276	Right-handed alpha
Helix 131	AO5	K	292	298	Right-handed alpha
Helix 132	AO6	L	286	291	Right-handed alpha
Helix 133	AO7	L	292	297	Right-handed alpha

There are 29 sheets in PDB entry 9WNS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	59	61	first strand
Strand 2	A	35	39	parallel
Strand 3	A	2	5	parallel
Strand 4	A	72	74	parallel
Strand 5	A	92	95	parallel
Strand 6	A	116	119	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	216	219	first strand
Strand 2	A	194	199	parallel
Strand 3	A	171	175	parallel
Strand 4	A	234	237	parallel
Strand 5	A	263	266	parallel
Strand 6	A	288	292	parallel
Strand 7	A	283	285	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	59	61	first strand
Strand 2	B	35	39	parallel
Strand 3	B	2	5	parallel
Strand 4	B	72	74	parallel
Strand 5	B	92	95	parallel
Strand 6	B	116	119	parallel
Strand 7	B	333	336	anti-parallel
Strand 8	B	339	340	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	216	219	first strand
Strand 2	B	194	199	parallel
Strand 3	B	171	175	parallel
Strand 4	B	234	237	parallel
Strand 5	B	263	266	parallel
Strand 6	B	288	291	parallel
Strand 7	B	282	285	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	61	first strand
Strand 2	C	35	39	parallel
Strand 3	C	2	5	parallel
Strand 4	C	72	74	parallel
Strand 5	C	92	94	parallel
Strand 6	C	116	118	parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	216	219	first strand
Strand 2	C	194	199	parallel
Strand 3	C	171	175	parallel
Strand 4	C	234	237	parallel
Strand 5	C	263	266	parallel
Strand 6	C	288	292	parallel
Strand 7	C	281	285	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	59	61	first strand
Strand 2	D	35	39	parallel
Strand 3	D	2	5	parallel
Strand 4	D	72	74	parallel
Strand 5	D	92	95	parallel
Strand 6	D	116	119	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	216	219	first strand
Strand 2	D	194	199	parallel
Strand 3	D	171	175	parallel
Strand 4	D	234	237	parallel
Strand 5	D	263	266	parallel
Strand 6	D	288	292	parallel
Strand 7	D	283	285	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	335	336	first strand
Strand 2	D	339	340	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	59	61	first strand
Strand 2	E	35	39	parallel
Strand 3	E	2	5	parallel
Strand 4	E	72	74	parallel
Strand 5	E	92	94	parallel
Strand 6	E	116	118	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	216	219	first strand
Strand 2	E	194	199	parallel
Strand 3	E	171	175	parallel
Strand 4	E	234	237	parallel
Strand 5	E	263	266	parallel
Strand 6	E	288	292	parallel
Strand 7	E	281	285	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	335	336	first strand
Strand 2	E	339	340	anti-parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	59	61	first strand
Strand 2	F	35	39	parallel
Strand 3	F	2	5	parallel
Strand 4	F	72	74	parallel
Strand 5	F	92	95	parallel
Strand 6	F	116	119	parallel
Strand 7	F	333	336	anti-parallel
Strand 8	F	339	340	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	216	219	first strand
Strand 2	F	194	199	parallel
Strand 3	F	171	175	parallel
Strand 4	F	234	237	parallel
Strand 5	F	263	266	parallel
Strand 6	F	288	292	parallel
Strand 7	F	282	285	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	92	93	first strand
Strand 2	G	71	75	parallel
Strand 3	G	49	53	parallel
Strand 4	G	22	25	parallel
Strand 5	G	114	119	parallel
Strand 6	G	146	151	parallel
Strand 7	G	171	174	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	127	129	first strand
Strand 2	G	163	165	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	230	231	first strand
Strand 2	G	207	210	parallel
Strand 3	G	303	305	parallel
Strand 4	G	347	351	parallel
Strand 5	G	381	384	parallel
Strand 6	G	387	390	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	235	236	first strand
Strand 2	G	265	266	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	261	263	first strand
Strand 2	G	282	284	parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	310	311	first strand
Strand 2	G	317	318	anti-parallel
Strand 3	G	372	374	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	321	322	first strand
Strand 2	G	325	326	anti-parallel

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There are 7 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	92	93	first strand
Strand 2	H	71	75	parallel
Strand 3	H	49	53	parallel
Strand 4	H	23	25	parallel
Strand 5	H	114	117	parallel
Strand 6	H	147	151	parallel
Strand 7	H	171	174	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	127	129	first strand
Strand 2	H	163	165	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	208	210	first strand
Strand 2	H	303	306	parallel
Strand 3	H	347	351	parallel
Strand 4	H	381	384	parallel
Strand 5	H	387	390	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	235	236	first strand
Strand 2	H	265	266	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	261	263	first strand
Strand 2	H	282	284	parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	317	318	first strand
Strand 2	H	310	312	anti-parallel
Strand 3	H	362	363	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	235	236	first strand
Strand 2	K	265	266	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	261	263	first strand
Strand 2	K	282	284	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9WNS

Analysis of interatomic Contacts of Structural Units in PDB entry:
9WNS