Analysis of interatomic Contacts of Structural Units in PDB entry:
9WOH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WOH entry

There are 2 chains in PDB entry 9WOH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 3LYS 416
B
 PRO 6LYS 416
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 9WOH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 21Right-handed alpha
Helix 2
AA2
A
23 32Right-handed alpha
Helix 3
AA3
A
51 59Right-handed alpha
Helix 4
AA4
A
71 79Right-handed alpha
Helix 5
AA5
A
83 87Right-handed 310
Helix 6
AA6
A
88 102Right-handed alpha
Helix 7
AA7
A
104 127Right-handed alpha
Helix 8
AA8
A
134 151Right-handed alpha
Helix 9
AA9
A
155 157Right-handed 310
Helix 10
AB1
A
158 171Right-handed alpha
Helix 11
AB2
A
172 175Right-handed 310
Helix 12
AB3
A
177 179Right-handed 310
Helix 13
AB4
A
180 185Right-handed alpha
Helix 14
AB5
A
186 203Right-handed alpha
Helix 15
AB6
A
212 220Right-handed alpha
Helix 16
AB7
A
229 246Right-handed alpha
Helix 17
AB8
A
246 261Right-handed alpha
Helix 18
AB9
A
262 271Right-handed alpha
Helix 19
AC1
A
272 287Right-handed alpha
Helix 20
AC2
A
317 323Right-handed alpha
Helix 21
AC3
A
335 340Right-handed 310
Helix 22
AC4
A
365 383Right-handed alpha
Helix 23
AC5
B
13 21Right-handed alpha
Helix 24
AC6
B
23 32Right-handed alpha
Helix 25
AC7
B
51 59Right-handed alpha
Helix 26
AC8
B
71 79Right-handed alpha
Helix 27
AC9
B
83 87Right-handed 310
Helix 28
AD1
B
88 102Right-handed alpha
Helix 29
AD2
B
104 127Right-handed alpha
Helix 30
AD3
B
134 151Right-handed alpha
Helix 31
AD4
B
155 157Right-handed 310
Helix 32
AD5
B
158 171Right-handed alpha
Helix 33
AD6
B
172 174Right-handed 310
Helix 34
AD7
B
180 203Right-handed alpha
Helix 35
AD8
B
212 219Right-handed alpha
Helix 36
AD9
B
229 261Right-handed alpha
Helix 37
AE1
B
262 270Right-handed alpha
Helix 38
AE2
B
272 287Right-handed alpha
Helix 39
AE3
B
317 323Right-handed alpha
Helix 40
AE4
B
335 340Right-handed 310
Helix 41
AE5
B
365 383Right-handed alpha
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There are 6 sheets in PDB entry 9WOH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 40first strand
Strand 2
A
45 49anti-parallel
Strand 3
A
313 316parallel
Strand 4
A
293 297anti-parallel
Strand 5
A
64 65anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 133first strand
Strand 2
A
409 415anti-parallel
Strand 3
A
384 387anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 302first strand
Strand 2
A
307 308anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 8first strand
Strand 2
B
36 41parallel
Strand 3
B
44 49anti-parallel
Strand 4
B
313 316parallel
Strand 5
B
293 297anti-parallel
Strand 6
B
64 65anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
132 133first strand
Strand 2
B
409 415anti-parallel
Strand 3
B
384 387anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
301 303first strand
Strand 2
B
306 308anti-parallel
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