Analysis of interatomic Contacts of Structural Units in PDB entry:
9WOO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WOO entry

There is 1 chain in PDB entry 9WOO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 395
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 9WOO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 18Right-handed alpha
Helix 2
AA2
A
20 40Right-handed alpha
Helix 3
AA3
A
45 48Right-handed 310
Helix 4
AA4
A
56 61Right-handed alpha
Helix 5
AA5
A
90 110Right-handed alpha
Helix 6
AA6
A
143 157Right-handed alpha
Helix 7
AA7
A
161 170Right-handed alpha
Helix 8
AA8
A
194 207Right-handed alpha
Helix 9
AA9
A
209 220Right-handed alpha
Helix 10
AB1
A
223 227Right-handed 310
Helix 11
AB2
A
228 232Right-handed 310
Helix 12
AB3
A
234 251Right-handed alpha
Helix 13
AB4
A
254 258Right-handed 310
Helix 14
AB5
A
260 272Right-handed alpha
Helix 15
AB6
A
277 289Right-handed alpha
Helix 16
AB7
A
290 293Right-handed 310
Helix 17
AB8
A
311 322Right-handed 310
Helix 18
AB9
A
323 344Right-handed alpha
Helix 19
AC1
A
347 360Right-handed alpha
Helix 20
AC2
A
364 372Right-handed alpha
Helix 21
AC3
A
375 379Right-handed 310
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There are 3 sheets in PDB entry 9WOO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 55first strand
Strand 2
A
72 80anti-parallel
Strand 3
A
132 141parallel
Strand 4
A
122 126anti-parallel
Strand 5
A
116 117anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 55first strand
Strand 2
A
72 80anti-parallel
Strand 3
A
132 141parallel
Strand 4
A
173 175anti-parallel
Strand 5
A
191 193anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 302first strand
Strand 2
A
305 309anti-parallel
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