Analysis of interatomic Contacts of Structural Units in PDB entry:
9WQZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WQZ entry

There is 1 chain in PDB entry 9WQZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 457
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 9WQZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 26Right-handed alpha
Helix 2
AA2
A
27 31Right-handed 310
Helix 3
AA3
A
59 64Right-handed alpha
Helix 4
AA4
A
71 85Right-handed alpha
Helix 5
AA5
A
95 109Right-handed alpha
Helix 6
AA6
A
121 138Right-handed alpha
Helix 7
AA7
A
153 160Right-handed alpha
Helix 8
AA8
A
163 167Right-handed 310
Helix 9
AA9
A
197 212Right-handed alpha
Helix 10
AB1
A
212 217Right-handed alpha
Helix 11
AB2
A
219 221Right-handed 310
Helix 12
AB3
A
243 255Right-handed alpha
Helix 13
AB4
A
275 281Right-handed 310
Helix 14
AB5
A
290 295Right-handed 310
Helix 15
AB6
A
306 310Right-handed alpha
Helix 16
AB7
A
323 340Right-handed alpha
Helix 17
AB8
A
341 364Right-handed alpha
Helix 18
AB9
A
389 403Right-handed alpha
Helix 19
AC1
A
426 446Right-handed alpha
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There are 3 sheets in PDB entry 9WQZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 43first strand
Strand 2
A
46 49anti-parallel
Strand 3
A
54 57anti-parallel
Strand 4
A
405 406parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 119first strand
Strand 2
A
300 305anti-parallel
Strand 3
A
286 289anti-parallel
Strand 4
A
258 262parallel
Strand 5
A
223 228parallel
Strand 6
A
141 145parallel
Strand 7
A
177 180parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
367 373first strand
Strand 2
A
376 381anti-parallel
Strand 3
A
416 419anti-parallel
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