Analysis of interatomic Contacts of Structural Units in PDB entry:
9WRL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9WRL entry

There are 6 chains in PDB entry 9WRL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	VAL 450
B	MET 1	VAL 450
C	MET 1	VAL 450
D	MET 1	VAL 450
E	MET 1	VAL 450
F	MET 1	VAL 450

There are102 helices in PDB entry 9WRL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	4	17	Right-handed alpha
Helix 2	AA2	A	42	48	Right-handed alpha
Helix 3	AA3	A	54	60	Right-handed 310
Helix 4	AA4	A	85	88	Right-handed 310
Helix 5	AA5	A	113	128	Right-handed alpha
Helix 6	AA6	A	159	166	Right-handed alpha
Helix 7	AA7	A	166	180	Right-handed alpha
Helix 8	AA8	A	204	226	Right-handed alpha
Helix 9	AA9	A	264	268	Right-handed 310
Helix 10	AB1	A	269	291	Right-handed alpha
Helix 11	AB2	A	295	300	Right-handed alpha
Helix 12	AB3	A	346	364	Right-handed alpha
Helix 13	AB4	A	380	388	Right-handed alpha
Helix 14	AB5	A	395	405	Right-handed alpha
Helix 15	AB6	A	406	414	Right-handed alpha
Helix 16	AB7	A	414	433	Right-handed alpha
Helix 17	AB8	A	436	444	Right-handed alpha
Helix 18	AB9	B	4	17	Right-handed alpha
Helix 19	AC1	B	42	48	Right-handed alpha
Helix 20	AC2	B	54	60	Right-handed 310
Helix 21	AC3	B	85	88	Right-handed 310
Helix 22	AC4	B	113	128	Right-handed alpha
Helix 23	AC5	B	159	166	Right-handed alpha
Helix 24	AC6	B	166	181	Right-handed alpha
Helix 25	AC7	B	204	226	Right-handed alpha
Helix 26	AC8	B	264	268	Right-handed 310
Helix 27	AC9	B	269	291	Right-handed alpha
Helix 28	AD1	B	295	300	Right-handed alpha
Helix 29	AD2	B	346	364	Right-handed alpha
Helix 30	AD3	B	380	387	Right-handed alpha
Helix 31	AD4	B	395	406	Right-handed alpha
Helix 32	AD5	B	406	414	Right-handed alpha
Helix 33	AD6	B	414	433	Right-handed alpha
Helix 34	AD7	B	436	444	Right-handed alpha
Helix 35	AD8	C	4	17	Right-handed alpha
Helix 36	AD9	C	42	48	Right-handed alpha
Helix 37	AE1	C	54	60	Right-handed 310
Helix 38	AE2	C	85	88	Right-handed 310
Helix 39	AE3	C	113	128	Right-handed alpha
Helix 40	AE4	C	159	166	Right-handed alpha
Helix 41	AE5	C	166	180	Right-handed alpha
Helix 42	AE6	C	204	226	Right-handed alpha
Helix 43	AE7	C	264	268	Right-handed 310
Helix 44	AE8	C	269	291	Right-handed alpha
Helix 45	AE9	C	295	300	Right-handed alpha
Helix 46	AF1	C	346	364	Right-handed alpha
Helix 47	AF2	C	380	387	Right-handed alpha
Helix 48	AF3	C	395	405	Right-handed alpha
Helix 49	AF4	C	406	414	Right-handed alpha
Helix 50	AF5	C	414	433	Right-handed alpha
Helix 51	AF6	C	436	444	Right-handed alpha
Helix 52	AF7	D	4	17	Right-handed alpha
Helix 53	AF8	D	42	48	Right-handed alpha
Helix 54	AF9	D	54	60	Right-handed 310
Helix 55	AG1	D	85	88	Right-handed 310
Helix 56	AG2	D	113	128	Right-handed alpha
Helix 57	AG3	D	159	166	Right-handed alpha
Helix 58	AG4	D	166	180	Right-handed alpha
Helix 59	AG5	D	204	226	Right-handed alpha
Helix 60	AG6	D	264	268	Right-handed 310
Helix 61	AG7	D	269	291	Right-handed alpha
Helix 62	AG8	D	295	300	Right-handed alpha
Helix 63	AG9	D	346	364	Right-handed alpha
Helix 64	AH1	D	380	387	Right-handed alpha
Helix 65	AH2	D	395	405	Right-handed alpha
Helix 66	AH3	D	406	414	Right-handed alpha
Helix 67	AH4	D	414	433	Right-handed alpha
Helix 68	AH5	D	436	444	Right-handed alpha
Helix 69	AH6	E	4	17	Right-handed alpha
Helix 70	AH7	E	42	48	Right-handed alpha
Helix 71	AH8	E	54	60	Right-handed 310
Helix 72	AH9	E	85	88	Right-handed 310
Helix 73	AI1	E	113	128	Right-handed alpha
Helix 74	AI2	E	159	166	Right-handed alpha
Helix 75	AI3	E	166	181	Right-handed alpha
Helix 76	AI4	E	204	226	Right-handed alpha
Helix 77	AI5	E	264	268	Right-handed 310
Helix 78	AI6	E	269	291	Right-handed alpha
Helix 79	AI7	E	295	300	Right-handed alpha
Helix 80	AI8	E	346	364	Right-handed alpha
Helix 81	AI9	E	380	387	Right-handed alpha
Helix 82	AJ1	E	395	405	Right-handed alpha
Helix 83	AJ2	E	406	414	Right-handed alpha
Helix 84	AJ3	E	414	433	Right-handed alpha
Helix 85	AJ4	E	436	444	Right-handed alpha
Helix 86	AJ5	F	4	18	Right-handed alpha
Helix 87	AJ6	F	42	48	Right-handed alpha
Helix 88	AJ7	F	54	60	Right-handed 310
Helix 89	AJ8	F	85	88	Right-handed 310
Helix 90	AJ9	F	113	129	Right-handed alpha
Helix 91	AK1	F	159	166	Right-handed alpha
Helix 92	AK2	F	166	180	Right-handed alpha
Helix 93	AK3	F	204	226	Right-handed alpha
Helix 94	AK4	F	264	268	Right-handed 310
Helix 95	AK5	F	269	291	Right-handed alpha
Helix 96	AK6	F	295	300	Right-handed alpha
Helix 97	AK7	F	346	365	Right-handed alpha
Helix 98	AK8	F	380	387	Right-handed alpha
Helix 99	AK9	F	395	405	Right-handed alpha
Helix 100	AL1	F	406	414	Right-handed alpha
Helix 101	AL2	F	414	433	Right-handed alpha
Helix 102	AL3	F	436	445	Right-handed alpha

There are 25 sheets in PDB entry 9WRL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	39	first strand
Strand 2	A	21	27	anti-parallel
Strand 3	A	95	103	parallel
Strand 4	A	79	83	anti-parallel
Strand 5	A	51	53	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	39	first strand
Strand 2	A	21	27	anti-parallel
Strand 3	A	95	103	parallel
Strand 4	A	89	92	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	184	189	first strand
Strand 2	A	195	200	anti-parallel
Strand 3	A	131	143	anti-parallel
Strand 4	A	247	253	anti-parallel
Strand 5	A	256	257	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	229	231	first strand
Strand 2	A	131	143	anti-parallel
Strand 3	A	247	253	anti-parallel
Strand 4	A	335	338	anti-parallel
Strand 5	A	319	324	anti-parallel
Strand 6	A	309	314	parallel
Strand 7	A	390	391	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	33	39	first strand
Strand 2	B	21	27	anti-parallel
Strand 3	B	95	103	parallel
Strand 4	B	79	83	anti-parallel
Strand 5	B	51	53	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	33	39	first strand
Strand 2	B	21	27	anti-parallel
Strand 3	B	95	103	parallel
Strand 4	B	89	92	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	184	189	first strand
Strand 2	B	195	200	anti-parallel
Strand 3	B	131	143	anti-parallel
Strand 4	B	229	231	anti-parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	184	189	first strand
Strand 2	B	195	200	anti-parallel
Strand 3	B	131	143	anti-parallel
Strand 4	B	247	252	anti-parallel
Strand 5	B	335	338	anti-parallel
Strand 6	B	319	324	anti-parallel
Strand 7	B	309	314	parallel
Strand 8	B	390	391	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	33	39	first strand
Strand 2	C	21	27	anti-parallel
Strand 3	C	95	103	parallel
Strand 4	C	79	83	anti-parallel
Strand 5	C	51	53	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	33	39	first strand
Strand 2	C	21	27	anti-parallel
Strand 3	C	95	103	parallel
Strand 4	C	89	92	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	184	189	first strand
Strand 2	C	195	200	anti-parallel
Strand 3	C	131	143	anti-parallel
Strand 4	C	247	253	anti-parallel
Strand 5	C	256	257	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	229	231	first strand
Strand 2	C	131	143	anti-parallel
Strand 3	C	247	253	anti-parallel
Strand 4	C	335	338	anti-parallel
Strand 5	C	321	324	anti-parallel
Strand 6	C	312	313	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	309	310	first strand
Strand 2	C	390	391	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	33	39	first strand
Strand 2	D	21	27	anti-parallel
Strand 3	D	95	103	parallel
Strand 4	D	79	83	anti-parallel
Strand 5	D	51	53	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	33	39	first strand
Strand 2	D	21	27	anti-parallel
Strand 3	D	95	103	parallel
Strand 4	D	89	92	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	184	189	first strand
Strand 2	D	195	200	anti-parallel
Strand 3	D	131	143	anti-parallel
Strand 4	D	247	253	anti-parallel
Strand 5	D	256	257	anti-parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	229	231	first strand
Strand 2	D	131	143	anti-parallel
Strand 3	D	247	253	anti-parallel
Strand 4	D	335	338	anti-parallel
Strand 5	D	319	324	anti-parallel
Strand 6	D	309	314	parallel
Strand 7	D	390	391	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	33	39	first strand
Strand 2	E	21	27	anti-parallel
Strand 3	E	95	103	parallel
Strand 4	E	79	83	anti-parallel
Strand 5	E	51	53	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	33	39	first strand
Strand 2	E	21	27	anti-parallel
Strand 3	E	95	103	parallel
Strand 4	E	89	92	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	184	189	first strand
Strand 2	E	195	200	anti-parallel
Strand 3	E	131	143	anti-parallel
Strand 4	E	229	231	anti-parallel

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There are 8 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	184	189	first strand
Strand 2	E	195	200	anti-parallel
Strand 3	E	131	143	anti-parallel
Strand 4	E	247	252	anti-parallel
Strand 5	E	335	338	anti-parallel
Strand 6	E	319	324	anti-parallel
Strand 7	E	309	314	parallel
Strand 8	E	390	391	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	33	39	first strand
Strand 2	F	21	27	anti-parallel
Strand 3	F	95	103	parallel
Strand 4	F	79	83	anti-parallel
Strand 5	F	51	53	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	33	39	first strand
Strand 2	F	21	27	anti-parallel
Strand 3	F	95	103	parallel
Strand 4	F	89	92	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	184	189	first strand
Strand 2	F	195	200	anti-parallel
Strand 3	F	131	143	anti-parallel
Strand 4	F	247	253	anti-parallel
Strand 5	F	256	257	anti-parallel

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There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	229	231	first strand
Strand 2	F	131	143	anti-parallel
Strand 3	F	247	253	anti-parallel
Strand 4	F	335	338	anti-parallel
Strand 5	F	319	324	anti-parallel
Strand 6	F	309	314	parallel
Strand 7	F	390	391	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9WRL

Analysis of interatomic Contacts of Structural Units in PDB entry:
9WRL