Analysis of interatomic Contacts of Structural Units in PDB entry:
9WRO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WRO entry

There are 4 chains in PDB entry 9WRO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 272
A
 PRO 274TRP 443
B
 MET 1ALA 272
B
 PRO 274TRP 443
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 9WRO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 14Right-handed alpha
Helix 2
AA2
A
15 19Right-handed 310
Helix 3
AA3
A
47 52Right-handed alpha
Helix 4
AA4
A
59 71Right-handed alpha
Helix 5
AA5
A
83 97Right-handed alpha
Helix 6
AA6
A
109 126Right-handed alpha
Helix 7
AA7
A
141 148Right-handed alpha
Helix 8
AA8
A
151 159Right-handed alpha
Helix 9
AA9
A
187 199Right-handed alpha
Helix 10
AB1
A
201 203Right-handed 310
Helix 11
AB2
A
225 237Right-handed alpha
Helix 12
AB3
A
257 263Right-handed 310
Helix 13
AB4
A
272 277Right-handed 310
Helix 14
AB5
A
288 292Right-handed alpha
Helix 15
AB6
A
306 323Right-handed alpha
Helix 16
AB7
A
324 347Right-handed alpha
Helix 17
AB8
A
374 388Right-handed alpha
Helix 18
AB9
A
409 429Right-handed alpha
Helix 19
AC1
A
433 440Right-handed 310
Helix 20
AC2
B
2 14Right-handed alpha
Helix 21
AC3
B
15 19Right-handed 310
Helix 22
AC4
B
47 52Right-handed alpha
Helix 23
AC5
B
59 71Right-handed alpha
Helix 24
AC6
B
83 97Right-handed alpha
Helix 25
AC7
B
109 126Right-handed alpha
Helix 26
AC8
B
141 148Right-handed alpha
Helix 27
AC9
B
151 159Right-handed alpha
Helix 28
AD1
B
187 199Right-handed alpha
Helix 29
AD2
B
201 203Right-handed 310
Helix 30
AD3
B
225 237Right-handed alpha
Helix 31
AD4
B
257 263Right-handed 310
Helix 32
AD5
B
272 277Right-handed 310
Helix 33
AD6
B
288 292Right-handed alpha
Helix 34
AD7
B
306 323Right-handed alpha
Helix 35
AD8
B
324 347Right-handed alpha
Helix 36
AD9
B
374 388Right-handed alpha
Helix 37
AE1
B
409 429Right-handed alpha
Helix 38
AE2
B
433 440Right-handed 310
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There are 6 sheets in PDB entry 9WRO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 31first strand
Strand 2
A
34 37anti-parallel
Strand 3
A
42 45anti-parallel
Strand 4
A
390 391parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 107first strand
Strand 2
A
282 287anti-parallel
Strand 3
A
268 271anti-parallel
Strand 4
A
240 244parallel
Strand 5
A
205 210parallel
Strand 6
A
129 133parallel
Strand 7
A
164 167parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
350 356first strand
Strand 2
A
359 364anti-parallel
Strand 3
A
399 402anti-parallel
Strand 4
A
393 395anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 31first strand
Strand 2
B
34 37anti-parallel
Strand 3
B
42 45anti-parallel
Strand 4
B
390 391parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 107first strand
Strand 2
B
282 287anti-parallel
Strand 3
B
268 271anti-parallel
Strand 4
B
240 244parallel
Strand 5
B
205 210parallel
Strand 6
B
129 133parallel
Strand 7
B
164 167parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
350 356first strand
Strand 2
B
359 364anti-parallel
Strand 3
B
399 402anti-parallel
Strand 4
B
393 395anti-parallel
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