Analysis of interatomic Contacts of Structural Units in PDB entry:
9WRZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9WRZ entry

There are 4 chains in PDB entry 9WRZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 7	GLY 211
B	ARG 8	GLY 211
C	ARG 8	GLY 211
D	ARG 8	TYR 64

There are 44 helices in PDB entry 9WRZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	17	Right-handed 310
Helix 2	AA2	A	18	22	Right-handed 310
Helix 3	AA3	A	31	40	Right-handed alpha
Helix 4	AA4	A	49	53	Right-handed alpha
Helix 5	AA5	A	99	103	Right-handed 310
Helix 6	AA6	A	112	132	Right-handed alpha
Helix 7	AA7	A	133	136	Right-handed 310
Helix 8	AA8	A	154	156	Right-handed 310
Helix 9	AA9	A	185	191	Right-handed 310
Helix 10	AB1	A	195	199	Right-handed 310
Helix 11	AB2	A	200	209	Right-handed alpha
Helix 12	AB3	B	15	17	Right-handed 310
Helix 13	AB4	B	18	22	Right-handed 310
Helix 14	AB5	B	31	40	Right-handed alpha
Helix 15	AB6	B	48	53	Right-handed alpha
Helix 16	AB7	B	99	103	Right-handed 310
Helix 17	AB8	B	112	132	Right-handed alpha
Helix 18	AB9	B	133	136	Right-handed 310
Helix 19	AC1	B	154	156	Right-handed 310
Helix 20	AC2	B	185	189	Right-handed 310
Helix 21	AC3	B	195	199	Right-handed 310
Helix 22	AC4	B	200	209	Right-handed alpha
Helix 23	AC5	C	15	17	Right-handed 310
Helix 24	AC6	C	18	22	Right-handed 310
Helix 25	AC7	C	31	40	Right-handed alpha
Helix 26	AC8	C	48	53	Right-handed alpha
Helix 27	AC9	C	99	103	Right-handed 310
Helix 28	AD1	C	113	132	Right-handed alpha
Helix 29	AD2	C	133	136	Right-handed 310
Helix 30	AD3	C	153	156	Right-handed 310
Helix 31	AD4	C	185	189	Right-handed 310
Helix 32	AD5	C	195	199	Right-handed 310
Helix 33	AD6	C	200	209	Right-handed alpha
Helix 34	AD7	D	15	17	Right-handed 310
Helix 35	AD8	D	18	22	Right-handed 310
Helix 36	AD9	D	31	40	Right-handed alpha
Helix 37	AE1	D	48	53	Right-handed alpha
Helix 38	AE2	D	99	103	Right-handed 310
Helix 39	AE3	D	113	132	Right-handed alpha
Helix 40	AE4	D	133	136	Right-handed 310
Helix 41	AE5	D	154	156	Right-handed 310
Helix 42	AE6	D	185	191	Right-handed 310
Helix 43	AE7	D	195	199	Right-handed 310
Helix 44	AE8	D	200	209	Right-handed alpha

There are 8 sheets in PDB entry 9WRZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	25	29	first strand
Strand 2	A	140	149	anti-parallel
Strand 3	A	158	166	anti-parallel
Strand 4	A	58	68	parallel
Strand 5	A	8	13	anti-parallel
Strand 6	A	45	48	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	91	first strand
Strand 2	A	74	78	anti-parallel
Strand 3	A	179	184	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	25	29	first strand
Strand 2	B	140	149	anti-parallel
Strand 3	B	158	166	anti-parallel
Strand 4	B	58	68	parallel
Strand 5	B	9	13	anti-parallel
Strand 6	B	45	47	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	91	first strand
Strand 2	B	74	78	anti-parallel
Strand 3	B	179	184	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	29	first strand
Strand 2	C	140	147	anti-parallel
Strand 3	C	158	166	anti-parallel
Strand 4	C	58	68	parallel
Strand 5	C	9	13	anti-parallel
Strand 6	C	45	47	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	90	91	first strand
Strand 2	C	74	78	anti-parallel
Strand 3	C	179	184	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	25	29	first strand
Strand 2	D	140	149	anti-parallel
Strand 3	D	158	166	anti-parallel
Strand 4	D	58	68	parallel
Strand 5	D	9	13	anti-parallel
Strand 6	D	45	47	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	90	91	first strand
Strand 2	D	74	78	anti-parallel
Strand 3	D	182	184	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9WRZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
9WRZ