Analysis of interatomic Contacts of Structural Units in PDB entry:
9WS5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WS5 entry

There is 1 chain in PDB entry 9WS5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 226SER 522
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 9WS5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
228 237Right-handed alpha
Helix 2
AA2
A
244 248Right-handed alpha
Helix 3
AA3
A
287 301Right-handed alpha
Helix 4
AA4
A
330 338Right-handed alpha
Helix 5
AA5
A
341 362Right-handed alpha
Helix 6
AA6
A
370 372Right-handed 310
Helix 7
AA7
A
423 439Right-handed alpha
Helix 8
AA8
A
442 447Right-handed alpha
Helix 9
AA9
A
447 457Right-handed alpha
Helix 10
AB1
A
459 465Right-handed alpha
Helix 11
AB2
A
470 481Right-handed alpha
Helix 12
AB3
A
490 495Right-handed alpha
Helix 13
AB4
A
496 503Right-handed 310
Helix 14
AB5
A
505 508Right-handed 310
Helix 15
AB6
A
509 522Right-handed alpha
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There are 2 sheets in PDB entry 9WS5. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
249 258first strand
Strand 2
A
261 268anti-parallel
Strand 3
A
274 281anti-parallel
Strand 4
A
318 324anti-parallel
Strand 5
A
309 315anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
374 376first strand
Strand 2
A
382 384anti-parallel
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