Analysis of interatomic Contacts of Structural Units in PDB entry:
9WSM

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9WSM entry

There are 8 chains in PDB entry 9WSM (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
1	T 55	G 108
2	C 1	A 54
E	VAL 4	ASP 68
F	GLN 16	ALA 247
A	PHE 8	VAL 231
B	VAL 5	PHE 230
C	TYR 3	THR 1356
D	GLU 15	ASP 1374

There are128 helices in PDB entry 9WSM. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	E	16	32	Right-handed alpha
Helix 2	AA2	E	45	56	Right-handed alpha
Helix 3	AA3	E	60	67	Right-handed alpha
Helix 4	AA4	F	17	39	Right-handed alpha
Helix 5	AA5	F	46	64	Right-handed alpha
Helix 6	AA6	F	72	92	Right-handed alpha
Helix 7	AA7	F	96	118	Right-handed alpha
Helix 8	AA8	F	122	130	Right-handed alpha
Helix 9	AA9	F	133	145	Right-handed alpha
Helix 10	AB1	F	152	157	Right-handed alpha
Helix 11	AB2	F	158	162	Right-handed 310
Helix 12	AB3	F	166	171	Right-handed alpha
Helix 13	AB4	F	173	193	Right-handed alpha
Helix 14	AB5	F	195	206	Right-handed alpha
Helix 15	AB6	F	212	220	Right-handed alpha
Helix 16	AB7	F	222	241	Right-handed alpha
Helix 17	AB8	A	35	50	Right-handed alpha
Helix 18	AB9	A	77	86	Right-handed alpha
Helix 19	AC1	A	113	115	Right-handed 310
Helix 20	AC2	A	211	228	Right-handed alpha
Helix 21	AC3	B	34	50	Right-handed alpha
Helix 22	AC4	B	77	87	Right-handed alpha
Helix 23	AC5	B	113	115	Right-handed 310
Helix 24	AC6	B	211	227	Right-handed alpha
Helix 25	AC7	C	6	10	Right-handed 310
Helix 26	AC8	C	28	40	Right-handed alpha
Helix 27	AC9	C	52	61	Right-handed alpha
Helix 28	AD1	C	85	93	Right-handed alpha
Helix 29	AD2	C	210	218	Right-handed alpha
Helix 30	AD3	C	220	229	Right-handed alpha
Helix 31	AD4	C	248	252	Right-handed 310
Helix 32	AD5	C	254	258	Right-handed 310
Helix 33	AD6	C	267	274	Right-handed 310
Helix 34	AD7	C	277	283	Right-handed alpha
Helix 35	AD8	C	293	297	Right-handed 310
Helix 36	AD9	C	323	331	Right-handed alpha
Helix 37	AE1	C	350	359	Right-handed alpha
Helix 38	AE2	C	363	376	Right-handed alpha
Helix 39	AE3	C	382	393	Right-handed alpha
Helix 40	AE4	C	403	414	Right-handed alpha
Helix 41	AE5	C	426	443	Right-handed alpha
Helix 42	AE6	C	460	485	Right-handed alpha
Helix 43	AE7	C	493	498	Right-handed alpha
Helix 44	AE8	C	500	514	Right-handed alpha
Helix 45	AE9	C	524	533	Right-handed alpha
Helix 46	AF1	C	549	554	Right-handed alpha
Helix 47	AF2	C	556	560	Right-handed 310
Helix 48	AF3	C	651	655	Right-handed 310
Helix 49	AF4	C	661	665	Right-handed 310
Helix 50	AF5	C	669	673	Right-handed 310
Helix 51	AF6	C	680	690	Right-handed alpha
Helix 52	AF7	C	709	717	Right-handed alpha
Helix 53	AF8	C	743	746	Right-handed 310
Helix 54	AF9	C	825	830	Right-handed alpha
Helix 55	AG1	C	865	870	Right-handed 310
Helix 56	AG2	C	901	912	Right-handed alpha
Helix 57	AG3	C	947	976	Right-handed alpha
Helix 58	AG4	C	1031	1055	Right-handed alpha
Helix 59	AG5	C	1116	1120	Right-handed 310
Helix 60	AG6	C	1125	1151	Right-handed alpha
Helix 61	AG7	C	1154	1167	Right-handed alpha
Helix 62	AG8	C	1175	1179	Right-handed 310
Helix 63	AG9	C	1180	1192	Right-handed alpha
Helix 64	AH1	C	1206	1217	Right-handed alpha
Helix 65	AH2	C	1253	1257	Right-handed 310
Helix 66	AH3	C	1286	1297	Right-handed alpha
Helix 67	AH4	C	1298	1307	Right-handed alpha
Helix 68	AH5	C	1312	1325	Right-handed alpha
Helix 69	AH6	C	1335	1348	Right-handed alpha
Helix 70	AH7	D	26	33	Right-handed alpha
Helix 71	AH8	D	58	63	Right-handed alpha
Helix 72	AH9	D	94	100	Right-handed 310
Helix 73	AI1	D	114	119	Right-handed alpha
Helix 74	AI2	D	122	129	Right-handed alpha
Helix 75	AI3	D	131	140	Right-handed alpha
Helix 76	AI4	D	161	172	Right-handed alpha
Helix 77	AI5	D	181	191	Right-handed alpha
Helix 78	AI6	D	193	205	Right-handed alpha
Helix 79	AI7	D	206	208	Right-handed 310
Helix 80	AI8	D	210	231	Right-handed alpha
Helix 81	AI9	D	233	236	Right-handed 310
Helix 82	AJ1	D	246	250	Right-handed 310
Helix 83	AJ2	D	263	285	Right-handed alpha
Helix 84	AJ3	D	288	308	Right-handed alpha
Helix 85	AJ4	D	309	313	Right-handed 310
Helix 86	AJ5	D	327	331	Right-handed 310
Helix 87	AJ6	D	336	341	Right-handed alpha
Helix 88	AJ7	D	370	377	Right-handed alpha
Helix 89	AJ8	D	377	389	Right-handed alpha
Helix 90	AJ9	D	393	403	Right-handed alpha
Helix 91	AK1	D	405	416	Right-handed alpha
Helix 92	AK2	D	417	419	Right-handed 310
Helix 93	AK3	D	430	432	Right-handed 310
Helix 94	AK4	D	452	458	Right-handed alpha
Helix 95	AK5	D	473	483	Right-handed alpha
Helix 96	AK6	D	485	489	Right-handed 310
Helix 97	AK7	D	504	514	Right-handed alpha
Helix 98	AK8	D	529	539	Right-handed alpha
Helix 99	AK9	D	574	580	Right-handed alpha
Helix 100	AL1	D	581	583	Right-handed 310
Helix 101	AL2	D	588	592	Right-handed 310
Helix 102	AL3	D	597	613	Right-handed alpha
Helix 103	AL4	D	613	635	Right-handed alpha
Helix 104	AL5	D	640	644	Right-handed 310
Helix 105	AL6	D	648	670	Right-handed alpha
Helix 106	AL7	D	674	704	Right-handed alpha
Helix 107	AL8	D	720	728	Right-handed alpha
Helix 108	AL9	D	733	738	Right-handed alpha
Helix 109	AM1	D	768	804	Right-handed alpha
Helix 110	AM2	D	834	839	Right-handed alpha
Helix 111	AM3	D	865	875	Right-handed alpha
Helix 112	AM4	D	884	888	Right-handed 310
Helix 113	AM5	D	896	900	Right-handed alpha
Helix 114	AM6	D	914	925	Right-handed alpha
Helix 115	AM7	D	926	930	Right-handed 310
Helix 116	AM8	D	998	1001	Right-handed 310
Helix 117	AM9	D	1055	1059	Right-handed 310
Helix 118	AN1	D	1137	1147	Right-handed alpha
Helix 119	AN2	D	1216	1224	Right-handed alpha
Helix 120	AN3	D	1225	1243	Right-handed alpha
Helix 121	AN4	D	1249	1261	Right-handed alpha
Helix 122	AN5	D	1283	1292	Right-handed alpha
Helix 123	AN6	D	1308	1315	Right-handed alpha
Helix 124	AN7	D	1318	1324	Right-handed alpha
Helix 125	AN8	D	1327	1339	Right-handed alpha
Helix 126	AN9	D	1346	1354	Right-handed alpha
Helix 127	AO1	D	1359	1361	Right-handed 310
Helix 128	AO2	D	1362	1374	Right-handed alpha

There are 47 sheets in PDB entry 9WSM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	150	151	first strand
Strand 2	D	260	262	parallel
Strand 3	D	252	254	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	15	18	first strand
Strand 2	A	23	31	anti-parallel
Strand 3	A	198	206	anti-parallel
Strand 4	A	179	188	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	97	105	first strand
Strand 2	A	138	148	anti-parallel
Strand 3	A	53	61	anti-parallel
Strand 4	A	170	171	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	92	first strand
Strand 2	A	121	123	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	111	first strand
Strand 2	A	129	133	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	151	152	first strand
Strand 2	A	174	175	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	15	20	first strand
Strand 2	B	23	31	anti-parallel
Strand 3	B	198	206	anti-parallel
Strand 4	B	179	188	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	104	first strand
Strand 2	B	139	149	anti-parallel
Strand 3	B	52	61	anti-parallel
Strand 4	B	169	171	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	109	111	first strand
Strand 2	B	129	132	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	151	152	first strand
Strand 2	B	174	175	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	14	first strand
Strand 2	C	1197	1198	parallel
Strand 3	C	705	706	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	63	64	first strand
Strand 2	C	70	79	anti-parallel
Strand 3	C	97	108	anti-parallel
Strand 4	C	121	132	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	140	142	first strand
Strand 2	C	145	149	anti-parallel
Strand 3	C	517	519	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	456	459	first strand
Strand 2	C	151	155	anti-parallel
Strand 3	C	534	536	parallel
Strand 4	C	577	579	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	158	163	first strand
Strand 2	C	176	181	anti-parallel
Strand 3	C	188	192	anti-parallel
Strand 4	C	198	201	anti-parallel
Strand 5	C	208	209	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	234	236	first strand
Strand 2	C	336	338	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	243	244	first strand
Strand 2	C	289	290	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	300	301	first strand
Strand 2	C	321	322	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	306	308	first strand
Strand 2	C	313	316	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	585	586	first strand
Strand 2	C	592	598	anti-parallel
Strand 3	C	608	611	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	585	586	first strand
Strand 2	C	592	598	anti-parallel
Strand 3	C	657	659	anti-parallel
Strand 4	C	620	622	parallel
Strand 5	C	639	643	anti-parallel
Strand 6	C	646	650	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	721	722	first strand
Strand 2	C	787	790	anti-parallel
Strand 3	C	773	774	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	754	757	first strand
Strand 2	C	736	741	anti-parallel
Strand 3	C	727	730	anti-parallel
Strand 4	C	781	782	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	762	763	first strand
Strand 2	C	769	770	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	794	795	first strand
Strand 2	C	798	799	anti-parallel

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There are 8 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1224	1225	first strand
Strand 2	C	1240	1249	anti-parallel
Strand 3	C	1082	1085	anti-parallel
Strand 4	C	1090	1097	anti-parallel
Strand 5	C	821	824	parallel
Strand 6	C	1113	1115	anti-parallel
Strand 7	C	803	809	parallel
Strand 8	C	1240	1249	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	851	852	first strand
Strand 2	C	836	848	anti-parallel
Strand 3	C	1063	1074	anti-parallel
Strand 4	C	931	940	anti-parallel
Strand 5	C	881	882	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	854	855	first strand
Strand 2	C	891	894	anti-parallel
Strand 3	C	918	920	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	887	889	first strand
Strand 2	C	923	924	anti-parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1259	1261	first strand
Strand 2	D	350	357	anti-parallel
Strand 3	D	465	469	anti-parallel
Strand 4	D	421	424	anti-parallel
Strand 5	D	434	442	anti-parallel
Strand 6	D	365	369	parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1259	1261	first strand
Strand 2	D	350	357	anti-parallel
Strand 3	D	447	449	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1284	1285	first strand
Strand 2	D	345	346	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1350	1355	first strand
Strand 2	D	19	24	anti-parallel
Strand 3	D	1341	1343	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	34	37	first strand
Strand 2	D	102	112	parallel
Strand 3	D	238	244	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	159	160	first strand
Strand 2	D	144	147	anti-parallel
Strand 3	D	177	179	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	526	527	first strand
Strand 2	D	547	556	parallel
Strand 3	D	564	573	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	706	708	first strand
Strand 2	D	713	715	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	809	811	first strand
Strand 2	D	894	895	parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	820	822	first strand
Strand 2	D	880	882	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	825	826	first strand
Strand 2	D	831	833	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	848	849	first strand
Strand 2	D	856	858	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	901	902	first strand
Strand 2	D	907	908	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	949	951	first strand
Strand 2	D	1016	1019	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	981	985	first strand
Strand 2	D	991	996	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1106	1107	first strand
Strand 2	D	1122	1123	anti-parallel

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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1162	1169	first strand
Strand 2	D	1172	1178	anti-parallel
Strand 3	D	1186	1191	anti-parallel

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There are 3 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1280	1282	first strand
Strand 2	D	1263	1266	anti-parallel
Strand 3	D	1302	1304	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9WSM

Analysis of interatomic Contacts of Structural Units in PDB entry:
9WSM