Analysis of interatomic Contacts of Structural Units in PDB entry:
9WSR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WSR entry

There are 3 chains in PDB entry 9WSR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLU 889SER 1161
C
 MET 1LYS 163
A
 SER 234PHE 993
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 9WSR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
890 902Right-handed alpha
Helix 2
AA2
B
905 913Right-handed alpha
Helix 3
AA3
B
916 924Right-handed alpha
Helix 4
AA4
B
941 952Right-handed alpha
Helix 5
AA5
B
964 973Right-handed alpha
Helix 6
AA6
B
987 992Right-handed alpha
Helix 7
AA7
B
993 996Right-handed 310
Helix 8
AA8
B
1014 1023Right-handed alpha
Helix 9
AA9
B
1051 1062Right-handed alpha
Helix 10
AB1
B
1077 1085Right-handed alpha
Helix 11
AB2
B
1090 1095Right-handed alpha
Helix 12
AB3
B
1109 1114Right-handed alpha
Helix 13
AB4
B
1115 1117Right-handed 310
Helix 14
AB5
B
1132 1144Right-handed alpha
Helix 15
AB6
C
18 22Right-handed alpha
Helix 16
AB7
C
24 34Right-handed alpha
Helix 17
AB8
C
51 65Right-handed alpha
Helix 18
AB9
C
75 80Right-handed alpha
Helix 19
AC1
C
86 93Right-handed alpha
Helix 20
AC2
C
96 110Right-handed alpha
Helix 21
AC3
C
112 126Right-handed alpha
Helix 22
AC4
C
131 140Right-handed alpha
Helix 23
AC5
C
146 157Right-handed alpha
Helix 24
AC6
C
157 163Right-handed alpha
Helix 25
AC7
A
235 246Right-handed alpha
Helix 26
AC8
A
251 261Right-handed alpha
Helix 27
AC9
A
262 268Right-handed alpha
Helix 28
AD1
A
271 289Right-handed alpha
Helix 29
AD2
A
292 297Right-handed alpha
Helix 30
AD3
A
298 310Right-handed alpha
Helix 31
AD4
A
323 341Right-handed alpha
Helix 32
AD5
A
347 353Right-handed alpha
Helix 33
AD6
A
356 366Right-handed alpha
Helix 34
AD7
A
383 398Right-handed alpha
Helix 35
AD8
A
413 419Right-handed alpha
Helix 36
AD9
A
428 438Right-handed alpha
Helix 37
AE1
A
440 452Right-handed alpha
Helix 38
AE2
A
457 470Right-handed alpha
Helix 39
AE3
A
475 491Right-handed alpha
Helix 40
AE4
A
494 501Right-handed alpha
Helix 41
AE5
A
515 526Right-handed alpha
Helix 42
AE6
A
550 554Right-handed 310
Helix 43
AE7
A
555 569Right-handed alpha
Helix 44
AE8
A
570 572Right-handed 310
Helix 45
AE9
A
588 600Right-handed alpha
Helix 46
AF1
A
623 628Right-handed 310
Helix 47
AF2
A
643 656Right-handed alpha
Helix 48
AF3
A
672 684Right-handed alpha
Helix 49
AF4
A
700 712Right-handed alpha
Helix 50
AF5
A
729 731Right-handed 310
Helix 51
AF6
A
732 743Right-handed alpha
Helix 52
AF7
A
757 769Right-handed alpha
Helix 53
AF8
A
786 797Right-handed alpha
Helix 54
AF9
A
798 800Right-handed 310
Helix 55
AG1
A
814 826Right-handed alpha
Helix 56
AG2
A
843 845Right-handed 310
Helix 57
AG3
A
846 857Right-handed alpha
Helix 58
AG4
A
871 883Right-handed alpha
Helix 59
AG5
A
900 902Right-handed 310
Helix 60
AG6
A
903 914Right-handed alpha
Helix 61
AG7
A
928 940Right-handed alpha
Helix 62
AG8
A
952 957Right-handed alpha
Helix 63
AG9
A
958 972Right-handed alpha
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There are 6 sheets in PDB entry 9WSR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
931 933first strand
Strand 2
B
955 957parallel
Strand 3
B
980 982parallel
Strand 4
B
1004 1006parallel
Strand 5
B
1042 1044parallel
Strand 6
B
1067 1069parallel
Strand 7
B
1097 1099parallel
Strand 8
B
1122 1124parallel
Strand 9
B
1156 1159anti-parallel
Strand 10
B
1149 1151anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 7first strand
Strand 2
C
13 17anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
344 346first strand
Strand 2
A
378 381anti-parallel
Strand 3
A
369 371anti-parallel
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There are 12 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
507 514first strand
Strand 2
A
533 543parallel
Strand 3
A
579 583parallel
Strand 4
A
608 612parallel
Strand 5
A
634 638parallel
Strand 6
A
663 667parallel
Strand 7
A
691 693parallel
Strand 8
A
720 722parallel
Strand 9
A
748 750parallel
Strand 10
A
777 779parallel
Strand 11
A
805 807parallel
Strand 12
A
834 836parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
586 587first strand
Strand 2
A
615 616parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
891 893first strand
Strand 2
A
919 921parallel
Strand 3
A
948 950parallel
Strand 4
A
976 978parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il