Analysis of interatomic Contacts of Structural Units in PDB entry:
9WT0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9WT0 entry

There are 4 chains in PDB entry 9WT0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
a	ALA 2	GLU 489
b	ALA 2	ASN 488
c	ALA 2	GLU 489
A	MET 14	LEU 933

There are 92 helices in PDB entry 9WT0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	a	22	45	Right-handed alpha
Helix 2	AA2	a	129	133	Right-handed 310
Helix 3	AA3	a	190	199	Right-handed alpha
Helix 4	AA4	a	200	207	Right-handed alpha
Helix 5	AA5	a	208	213	Right-handed alpha
Helix 6	AA6	a	226	230	Right-handed 310
Helix 7	AA7	a	232	246	Right-handed alpha
Helix 8	AA8	a	248	263	Right-handed alpha
Helix 9	AA9	a	271	277	Right-handed 310
Helix 10	AB1	a	281	285	Right-handed 310
Helix 11	AB2	a	287	310	Right-handed alpha
Helix 12	AB3	a	355	373	Right-handed alpha
Helix 13	AB4	a	404	409	Right-handed alpha
Helix 14	AB5	a	413	418	Right-handed alpha
Helix 15	AB6	a	420	424	Right-handed 310
Helix 16	AB7	a	440	444	Right-handed 310
Helix 17	AB8	a	456	460	Right-handed 310
Helix 18	AB9	a	461	476	Right-handed alpha
Helix 19	AC1	b	22	45	Right-handed alpha
Helix 20	AC2	b	190	198	Right-handed alpha
Helix 21	AC3	b	200	207	Right-handed alpha
Helix 22	AC4	b	208	213	Right-handed alpha
Helix 23	AC5	b	226	230	Right-handed 310
Helix 24	AC6	b	232	246	Right-handed alpha
Helix 25	AC7	b	248	263	Right-handed alpha
Helix 26	AC8	b	269	274	Right-handed alpha
Helix 27	AC9	b	275	278	Right-handed 310
Helix 28	AD1	b	287	311	Right-handed alpha
Helix 29	AD2	b	354	373	Right-handed alpha
Helix 30	AD3	b	404	409	Right-handed alpha
Helix 31	AD4	b	412	419	Right-handed alpha
Helix 32	AD5	b	420	424	Right-handed 310
Helix 33	AD6	b	440	444	Right-handed 310
Helix 34	AD7	b	461	476	Right-handed alpha
Helix 35	AD8	c	22	44	Right-handed alpha
Helix 36	AD9	c	114	118	Right-handed 310
Helix 37	AE1	c	131	133	Right-handed 310
Helix 38	AE2	c	143	145	Right-handed 310
Helix 39	AE3	c	189	198	Right-handed alpha
Helix 40	AE4	c	200	207	Right-handed alpha
Helix 41	AE5	c	208	215	Right-handed alpha
Helix 42	AE6	c	226	230	Right-handed 310
Helix 43	AE7	c	232	246	Right-handed alpha
Helix 44	AE8	c	248	263	Right-handed alpha
Helix 45	AE9	c	269	274	Right-handed alpha
Helix 46	AF1	c	275	277	Right-handed 310
Helix 47	AF2	c	287	311	Right-handed alpha
Helix 48	AF3	c	355	373	Right-handed alpha
Helix 49	AF4	c	405	412	Right-handed alpha
Helix 50	AF5	c	412	417	Right-handed alpha
Helix 51	AF6	c	420	424	Right-handed 310
Helix 52	AF7	c	440	444	Right-handed 310
Helix 53	AF8	c	461	476	Right-handed alpha
Helix 54	AF9	A	21	38	Right-handed alpha
Helix 55	AG1	A	48	69	Right-handed alpha
Helix 56	AG2	A	71	76	Right-handed alpha
Helix 57	AG3	A	89	94	Right-handed alpha
Helix 58	AG4	A	100	109	Right-handed alpha
Helix 59	AG5	A	138	143	Right-handed 310
Helix 60	AG6	A	146	148	Right-handed 310
Helix 61	AG7	A	173	187	Right-handed alpha
Helix 62	AG8	A	218	235	Right-handed alpha
Helix 63	AG9	A	242	249	Right-handed alpha
Helix 64	AH1	A	252	257	Right-handed alpha
Helix 65	AH2	A	268	274	Right-handed alpha
Helix 66	AH3	A	283	292	Right-handed alpha
Helix 67	AH4	A	348	367	Right-handed alpha
Helix 68	AH5	A	368	372	Right-handed 310
Helix 69	AH6	A	391	395	Right-handed 310
Helix 70	AH7	A	397	401	Right-handed 310
Helix 71	AH8	A	408	411	Right-handed 310
Helix 72	AH9	A	412	439	Right-handed alpha
Helix 73	AI1	A	467	472	Right-handed alpha
Helix 74	AI2	A	474	479	Right-handed 310
Helix 75	AI3	A	480	489	Right-handed alpha
Helix 76	AI4	A	490	493	Right-handed 310
Helix 77	AI5	A	494	509	Right-handed alpha
Helix 78	AI6	A	514	526	Right-handed alpha
Helix 79	AI7	A	528	543	Right-handed alpha
Helix 80	AI8	A	543	548	Right-handed alpha
Helix 81	AI9	A	561	565	Right-handed 310
Helix 82	AJ1	A	572	582	Right-handed alpha
Helix 83	AJ2	A	632	649	Right-handed alpha
Helix 84	AJ3	A	654	659	Right-handed alpha
Helix 85	AJ4	A	718	727	Right-handed alpha
Helix 86	AJ5	A	741	743	Right-handed 310
Helix 87	AJ6	A	748	755	Right-handed alpha
Helix 88	AJ7	A	772	780	Right-handed alpha
Helix 89	AJ8	A	802	816	Right-handed alpha
Helix 90	AJ9	A	854	871	Right-handed alpha
Helix 91	AK1	A	872	877	Right-handed alpha
Helix 92	AK2	A	879	899	Right-handed alpha

There are 26 sheets in PDB entry 9WT0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	13	14	first strand
Strand 2	c	177	188	anti-parallel
Strand 3	c	124	129	anti-parallel
Strand 4	c	98	106	anti-parallel
Strand 5	c	140	141	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	55	59	first strand
Strand 2	c	62	66	anti-parallel
Strand 3	c	98	106	anti-parallel
Strand 4	c	124	129	anti-parallel
Strand 5	c	177	188	anti-parallel
Strand 6	c	152	163	anti-parallel
Strand 7	c	326	329	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	46	48	first strand
Strand 2	a	345	347	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	55	59	first strand
Strand 2	a	62	66	anti-parallel
Strand 3	a	98	101	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	70	71	first strand
Strand 2	a	77	78	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	81	84	first strand
Strand 2	a	90	94	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	140	141	first strand
Strand 2	a	103	105	anti-parallel
Strand 3	a	124	128	anti-parallel
Strand 4	a	177	189	anti-parallel
Strand 5	a	151	162	anti-parallel
Strand 6	a	326	331	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	140	141	first strand
Strand 2	a	103	105	anti-parallel
Strand 3	a	124	128	anti-parallel
Strand 4	a	177	189	anti-parallel
Strand 5	b	12	14	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	382	384	first strand
Strand 2	a	453	455	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	19	20	first strand
Strand 2	A	929	930	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	77	78	first strand
Strand 2	b	69	71	anti-parallel
Strand 3	b	46	51	anti-parallel
Strand 4	b	345	347	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	55	56	first strand
Strand 2	b	63	66	anti-parallel
Strand 3	b	98	106	anti-parallel
Strand 4	b	124	129	anti-parallel
Strand 5	b	177	189	anti-parallel
Strand 6	b	151	162	anti-parallel
Strand 7	b	326	329	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	140	141	first strand
Strand 2	b	98	106	anti-parallel
Strand 3	b	124	129	anti-parallel
Strand 4	b	177	189	anti-parallel
Strand 5	c	12	14	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	81	82	first strand
Strand 2	b	93	94	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	382	386	first strand
Strand 2	b	451	455	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	77	78	first strand
Strand 2	c	69	71	anti-parallel
Strand 3	c	46	51	anti-parallel
Strand 4	c	345	347	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	81	83	first strand
Strand 2	c	92	94	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	382	386	first strand
Strand 2	c	451	455	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	114	121	first strand
Strand 2	A	158	165	anti-parallel
Strand 3	A	193	199	parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	134	136	first strand
Strand 2	A	125	129	anti-parallel
Strand 3	A	150	154	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	296	305	first strand
Strand 2	A	201	213	anti-parallel
Strand 3	A	326	330	parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	296	305	first strand
Strand 2	A	201	213	anti-parallel
Strand 3	A	335	340	parallel
Strand 4	A	343	344	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	280	282	first strand
Strand 2	A	319	321	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	598	603	first strand
Strand 2	A	610	615	anti-parallel
Strand 3	A	624	625	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	736	739	first strand
Strand 2	A	788	794	anti-parallel
Strand 3	A	822	828	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	838	839	first strand
Strand 2	A	850	851	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9WT0

Analysis of interatomic Contacts of Structural Units in PDB entry:
9WT0