Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 9WT3 entry
There are 8 chains in PDB entry 9WT3
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
A
|
SER 4 | GLY 49 |
B
|
LYS 5 | THR 50 |
C
|
LYS 5 | GLY 49 |
D
|
LYS 5 | THR 50 |
E
|
ILE 7 | LYS 48 |
F
|
THR 6 | LEU 46 |
G
|
LYS 5 | GLY 49 |
H
|
THR 6 | THR 50 |
Back to top of page
There are 8
helices in PDB entry 9WT3. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
| Helix 1 |
AA1 | A
| 6 |
49 | Right-handed alpha |
| Helix 2 |
AA2 | B
| 6 |
50 | Right-handed alpha |
| Helix 3 |
AA3 | C
| 6 |
48 | Right-handed alpha |
| Helix 4 |
AA4 | D
| 6 |
50 | Right-handed alpha |
| Helix 5 |
AA5 | E
| 10 |
48 | Right-handed alpha |
| Helix 6 |
AA6 | F
| 7 |
46 | Right-handed alpha |
| Helix 7 |
AA7 | G
| 6 |
49 | Right-handed alpha |
| Helix 8 |
AA8 | H
| 7 |
50 | Right-handed alpha |
Back to top of page
There are no sheets in PDB entry
9WT3
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il