Analysis of interatomic Contacts of Structural Units in PDB entry:
9WTS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WTS entry

There are 2 chains in PDB entry 9WTS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 3ILE 428
B
 GLY 4ILE 428
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 9WTS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 34Right-handed alpha
Helix 2
AA2
A
56 71Right-handed alpha
Helix 3
AA3
A
72 76Right-handed 310
Helix 4
AA4
A
105 110Right-handed 310
Helix 5
AA5
A
115 122Right-handed 310
Helix 6
AA6
A
161 177Right-handed alpha
Helix 7
AA7
A
188 193Right-handed 310
Helix 8
AA8
A
204 208Right-handed 310
Helix 9
AA9
A
231 241Right-handed alpha
Helix 10
AB1
A
242 244Right-handed 310
Helix 11
AB2
A
252 270Right-handed alpha
Helix 12
AB3
A
311 317Right-handed alpha
Helix 13
AB4
A
318 332Right-handed alpha
Helix 14
AB5
A
334 348Right-handed alpha
Helix 15
AB6
A
415 427Right-handed alpha
Helix 16
AB7
B
29 34Right-handed alpha
Helix 17
AB8
B
56 71Right-handed alpha
Helix 18
AB9
B
72 76Right-handed 310
Helix 19
AC1
B
105 110Right-handed 310
Helix 20
AC2
B
115 122Right-handed 310
Helix 21
AC3
B
161 178Right-handed alpha
Helix 22
AC4
B
188 193Right-handed 310
Helix 23
AC5
B
204 208Right-handed 310
Helix 24
AC6
B
219 221Right-handed 310
Helix 25
AC7
B
231 241Right-handed alpha
Helix 26
AC8
B
242 244Right-handed 310
Helix 27
AC9
B
252 270Right-handed alpha
Helix 28
AD1
B
311 317Right-handed alpha
Helix 29
AD2
B
318 332Right-handed alpha
Helix 30
AD3
B
334 348Right-handed alpha
Helix 31
AD4
B
415 427Right-handed alpha
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There are 6 sheets in PDB entry 9WTS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 15first strand
Strand 2
A
95 102anti-parallel
Strand 3
A
137 143parallel
Strand 4
A
149 156anti-parallel
Strand 5
A
39 46anti-parallel
Strand 6
A
383 386anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 26first strand
Strand 2
A
86 90anti-parallel
Strand 3
A
77 80anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 230first strand
Strand 2
A
407 414anti-parallel
Strand 3
A
394 399anti-parallel
Strand 4
A
361 365parallel
Strand 5
A
276 284parallel
Strand 6
A
302 310anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 15first strand
Strand 2
B
95 102anti-parallel
Strand 3
B
137 143parallel
Strand 4
B
149 156anti-parallel
Strand 5
B
39 46anti-parallel
Strand 6
B
383 386anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 26first strand
Strand 2
B
86 90anti-parallel
Strand 3
B
77 80anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
223 230first strand
Strand 2
B
407 414anti-parallel
Strand 3
B
394 399anti-parallel
Strand 4
B
361 365parallel
Strand 5
B
276 284parallel
Strand 6
B
302 310anti-parallel
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