Analysis of interatomic Contacts of Structural Units in PDB entry:
9WTX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WTX entry

There is 1 chain in PDB entry 9WTX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1GLU 520
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 9WTX. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
3 12Right-handed alpha
Helix 2
AA2
A
15 28Right-handed alpha
Helix 3
AA3
A
29 35Right-handed alpha
Helix 4
AA4
A
38 43Right-handed alpha
Helix 5
AA5
A
59 64Right-handed alpha
Helix 6
AA6
A
85 95Right-handed alpha
Helix 7
AA7
A
104 108Right-handed 310
Helix 8
AA8
A
127 133Right-handed alpha
Helix 9
AA9
A
135 139Right-handed 310
Helix 10
AB1
A
140 168Right-handed alpha
Helix 11
AB2
A
170 189Right-handed alpha
Helix 12
AB3
A
192 222Right-handed alpha
Helix 13
AB4
A
224 233Right-handed alpha
Helix 14
AB5
A
233 253Right-handed alpha
Helix 15
AB6
A
255 270Right-handed alpha
Helix 16
AB7
A
273 277Right-handed 310
Helix 17
AB8
A
280 286Right-handed alpha
Helix 18
AB9
A
292 305Right-handed alpha
Helix 19
AC1
A
336 362Right-handed alpha
Helix 20
AC2
A
372 394Right-handed alpha
Helix 21
AC3
A
398 416Right-handed alpha
Helix 22
AC4
A
423 450Right-handed alpha
Helix 23
AC5
A
456 461Right-handed alpha
Helix 24
AC6
A
462 475Right-handed alpha
Helix 25
AC7
A
475 481Right-handed alpha
Helix 26
AC8
A
487 505Right-handed alpha
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There are 3 sheets in PDB entry 9WTX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
48 50first strand
Strand 2
A
117 119anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
69 70first strand
Strand 2
A
77 78anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
83 84first strand
Strand 2
A
110 111anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il