Analysis of interatomic Contacts of Structural Units in PDB entry:
9WUC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9WUC entry

There are 2 chains in PDB entry 9WUC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 5	LEU 1067
B	ASN 5	LEU 1067

There are 93 helices in PDB entry 9WUC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	17	Right-handed 310
Helix 2	AA2	A	18	22	Right-handed 310
Helix 3	AA3	A	26	39	Right-handed alpha
Helix 4	AA4	A	56	64	Right-handed alpha
Helix 5	AA5	A	75	85	Right-handed alpha
Helix 6	AA6	A	95	106	Right-handed alpha
Helix 7	AA7	A	107	110	Right-handed 310
Helix 8	AA8	A	111	115	Right-handed 310
Helix 9	AA9	A	117	135	Right-handed alpha
Helix 10	AB1	A	143	161	Right-handed alpha
Helix 11	AB2	A	173	191	Right-handed alpha
Helix 12	AB3	A	193	200	Right-handed alpha
Helix 13	AB4	A	200	227	Right-handed alpha
Helix 14	AB5	A	235	243	Right-handed alpha
Helix 15	AB6	A	253	282	Right-handed alpha
Helix 16	AB7	A	286	301	Right-handed alpha
Helix 17	AB8	A	307	313	Right-handed alpha
Helix 18	AB9	A	314	328	Right-handed alpha
Helix 19	AC1	A	361	365	Right-handed alpha
Helix 20	AC2	A	367	372	Right-handed alpha
Helix 21	AC3	A	379	384	Right-handed 310
Helix 22	AC4	A	390	394	Right-handed 310
Helix 23	AC5	A	399	403	Right-handed 310
Helix 24	AC6	A	406	424	Right-handed alpha
Helix 25	AC7	A	508	524	Right-handed alpha
Helix 26	AC8	A	534	536	Right-handed 310
Helix 27	AC9	A	561	571	Right-handed alpha
Helix 28	AD1	A	596	609	Right-handed alpha
Helix 29	AD2	A	625	645	Right-handed alpha
Helix 30	AD3	A	692	696	Right-handed 310
Helix 31	AD4	A	725	736	Right-handed alpha
Helix 32	AD5	A	764	771	Right-handed alpha
Helix 33	AD6	A	779	789	Right-handed alpha
Helix 34	AD7	A	792	801	Right-handed alpha
Helix 35	AD8	A	802	804	Right-handed 310
Helix 36	AD9	A	806	812	Right-handed alpha
Helix 37	AE1	A	818	826	Right-handed alpha
Helix 38	AE2	A	832	840	Right-handed alpha
Helix 39	AE3	A	881	889	Right-handed alpha
Helix 40	AE4	A	922	925	Right-handed 310
Helix 41	AE5	A	926	942	Right-handed alpha
Helix 42	AE6	A	963	973	Right-handed alpha
Helix 43	AE7	A	992	1000	Right-handed alpha
Helix 44	AE8	A	1000	1011	Right-handed alpha
Helix 45	AE9	A	1022	1040	Right-handed alpha
Helix 46	AF1	A	1042	1056	Right-handed alpha
Helix 47	AF2	B	13	17	Right-handed 310
Helix 48	AF3	B	18	22	Right-handed 310
Helix 49	AF4	B	26	38	Right-handed alpha
Helix 50	AF5	B	56	64	Right-handed alpha
Helix 51	AF6	B	75	85	Right-handed alpha
Helix 52	AF7	B	95	106	Right-handed alpha
Helix 53	AF8	B	107	110	Right-handed 310
Helix 54	AF9	B	111	115	Right-handed 310
Helix 55	AG1	B	117	134	Right-handed alpha
Helix 56	AG2	B	143	161	Right-handed alpha
Helix 57	AG3	B	165	169	Right-handed 310
Helix 58	AG4	B	173	191	Right-handed alpha
Helix 59	AG5	B	193	200	Right-handed alpha
Helix 60	AG6	B	200	227	Right-handed alpha
Helix 61	AG7	B	235	243	Right-handed alpha
Helix 62	AG8	B	253	282	Right-handed alpha
Helix 63	AG9	B	286	301	Right-handed alpha
Helix 64	AH1	B	307	313	Right-handed alpha
Helix 65	AH2	B	314	326	Right-handed alpha
Helix 66	AH3	B	361	365	Right-handed alpha
Helix 67	AH4	B	367	372	Right-handed alpha
Helix 68	AH5	B	379	384	Right-handed 310
Helix 69	AH6	B	399	403	Right-handed 310
Helix 70	AH7	B	406	424	Right-handed alpha
Helix 71	AH8	B	508	524	Right-handed alpha
Helix 72	AH9	B	534	537	Right-handed 310
Helix 73	AI1	B	561	571	Right-handed alpha
Helix 74	AI2	B	588	595	Right-handed 310
Helix 75	AI3	B	596	609	Right-handed alpha
Helix 76	AI4	B	625	645	Right-handed alpha
Helix 77	AI5	B	650	655	Right-handed 310
Helix 78	AI6	B	692	696	Right-handed 310
Helix 79	AI7	B	725	736	Right-handed alpha
Helix 80	AI8	B	764	771	Right-handed alpha
Helix 81	AI9	B	779	789	Right-handed alpha
Helix 82	AJ1	B	792	802	Right-handed alpha
Helix 83	AJ2	B	806	812	Right-handed alpha
Helix 84	AJ3	B	818	826	Right-handed alpha
Helix 85	AJ4	B	832	838	Right-handed alpha
Helix 86	AJ5	B	881	889	Right-handed alpha
Helix 87	AJ6	B	922	925	Right-handed 310
Helix 88	AJ7	B	926	943	Right-handed alpha
Helix 89	AJ8	B	963	974	Right-handed alpha
Helix 90	AJ9	B	992	999	Right-handed alpha
Helix 91	AK1	B	1000	1011	Right-handed alpha
Helix 92	AK2	B	1023	1040	Right-handed alpha
Helix 93	AK3	B	1044	1057	Right-handed alpha

There are 22 sheets in PDB entry 9WUC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	41	46	first strand
Strand 2	A	49	54	anti-parallel
Strand 3	A	356	360	parallel
Strand 4	A	333	338	anti-parallel
Strand 5	A	69	71	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	141	142	first strand
Strand 2	A	449	454	anti-parallel
Strand 3	A	425	428	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	342	344	first strand
Strand 2	A	348	350	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	437	439	first strand
Strand 2	A	443	445	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	528	532	first strand
Strand 2	A	499	504	parallel
Strand 3	A	545	551	parallel
Strand 4	A	580	587	parallel
Strand 5	A	612	613	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	528	532	first strand
Strand 2	A	499	504	parallel
Strand 3	A	545	551	parallel
Strand 4	A	580	587	parallel
Strand 5	A	618	621	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	660	661	first strand
Strand 2	B	747	748	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	664	665	first strand
Strand 2	B	743	745	anti-parallel
Strand 3	B	761	763	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	717	720	first strand
Strand 2	A	895	901	anti-parallel
Strand 3	A	680	689	anti-parallel
Strand 4	A	698	705	anti-parallel
Strand 5	A	860	867	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	761	763	first strand
Strand 2	A	743	748	anti-parallel
Strand 3	B	660	665	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	772	773	first strand
Strand 2	A	841	842	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	869	871	first strand
Strand 2	A	878	880	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	976	982	first strand
Strand 2	A	949	955	parallel
Strand 3	A	917	920	parallel
Strand 4	A	1013	1019	parallel
Strand 5	A	1059	1064	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	41	45	first strand
Strand 2	B	50	54	anti-parallel
Strand 3	B	356	360	parallel
Strand 4	B	333	338	anti-parallel
Strand 5	B	69	71	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	141	142	first strand
Strand 2	B	449	454	anti-parallel
Strand 3	B	425	428	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	342	344	first strand
Strand 2	B	348	350	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	437	439	first strand
Strand 2	B	443	445	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	528	532	first strand
Strand 2	B	499	504	parallel
Strand 3	B	545	551	parallel
Strand 4	B	580	587	parallel
Strand 5	B	618	621	parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	717	720	first strand
Strand 2	B	895	901	anti-parallel
Strand 3	B	680	689	anti-parallel
Strand 4	B	698	705	anti-parallel
Strand 5	B	860	867	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	772	773	first strand
Strand 2	B	841	842	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	869	871	first strand
Strand 2	B	878	880	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	977	980	first strand
Strand 2	B	949	953	parallel
Strand 3	B	917	920	parallel
Strand 4	B	1013	1019	parallel
Strand 5	B	1059	1064	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9WUC

Analysis of interatomic Contacts of Structural Units in PDB entry:
9WUC