Analysis of interatomic Contacts of Structural Units in PDB entry:
9WUK

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9WUK entry

There are 2 chains in PDB entry 9WUK (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 5	LEU 1036
B	ASN 5	LEU 1036

There are 92 helices in PDB entry 9WUK. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	17	Right-handed 310
Helix 2	AA2	A	18	22	Right-handed 310
Helix 3	AA3	A	26	39	Right-handed alpha
Helix 4	AA4	A	56	64	Right-handed alpha
Helix 5	AA5	A	75	85	Right-handed alpha
Helix 6	AA6	A	95	106	Right-handed alpha
Helix 7	AA7	A	107	110	Right-handed 310
Helix 8	AA8	A	111	112	Right-handed 310
Helix 9	AA9	A	113	134	Right-handed alpha
Helix 10	AB1	A	143	161	Right-handed alpha
Helix 11	AB2	A	173	191	Right-handed alpha
Helix 12	AB3	A	193	200	Right-handed alpha
Helix 13	AB4	A	200	227	Right-handed alpha
Helix 14	AB5	A	235	243	Right-handed alpha
Helix 15	AB6	A	253	286	Right-handed alpha
Helix 16	AB7	A	286	301	Right-handed alpha
Helix 17	AB8	A	307	313	Right-handed alpha
Helix 18	AB9	A	314	328	Right-handed alpha
Helix 19	AC1	A	361	366	Right-handed alpha
Helix 20	AC2	A	367	372	Right-handed alpha
Helix 21	AC3	A	379	384	Right-handed 310
Helix 22	AC4	A	385	389	Right-handed 310
Helix 23	AC5	A	390	394	Right-handed 310
Helix 24	AC6	A	399	403	Right-handed 310
Helix 25	AC7	A	406	424	Right-handed alpha
Helix 26	AC8	A	477	493	Right-handed alpha
Helix 27	AC9	A	503	506	Right-handed 310
Helix 28	AD1	A	530	540	Right-handed alpha
Helix 29	AD2	A	565	578	Right-handed alpha
Helix 30	AD3	A	594	615	Right-handed alpha
Helix 31	AD4	A	694	705	Right-handed alpha
Helix 32	AD5	A	733	740	Right-handed alpha
Helix 33	AD6	A	748	758	Right-handed alpha
Helix 34	AD7	A	761	771	Right-handed alpha
Helix 35	AD8	A	775	781	Right-handed alpha
Helix 36	AD9	A	787	795	Right-handed alpha
Helix 37	AE1	A	801	809	Right-handed alpha
Helix 38	AE2	A	850	858	Right-handed alpha
Helix 39	AE3	A	891	894	Right-handed 310
Helix 40	AE4	A	895	911	Right-handed alpha
Helix 41	AE5	A	926	930	Right-handed 310
Helix 42	AE6	A	932	942	Right-handed alpha
Helix 43	AE7	A	961	969	Right-handed alpha
Helix 44	AE8	A	969	979	Right-handed alpha
Helix 45	AE9	A	991	1009	Right-handed alpha
Helix 46	AF1	A	1011	1026	Right-handed alpha
Helix 47	AF2	B	26	39	Right-handed alpha
Helix 48	AF3	B	56	64	Right-handed alpha
Helix 49	AF4	B	75	85	Right-handed alpha
Helix 50	AF5	B	95	106	Right-handed alpha
Helix 51	AF6	B	107	110	Right-handed 310
Helix 52	AF7	B	111	113	Right-handed 310
Helix 53	AF8	B	114	135	Right-handed alpha
Helix 54	AF9	B	143	161	Right-handed alpha
Helix 55	AG1	B	165	169	Right-handed 310
Helix 56	AG2	B	173	191	Right-handed alpha
Helix 57	AG3	B	193	200	Right-handed alpha
Helix 58	AG4	B	200	227	Right-handed alpha
Helix 59	AG5	B	235	243	Right-handed alpha
Helix 60	AG6	B	253	282	Right-handed alpha
Helix 61	AG7	B	286	301	Right-handed alpha
Helix 62	AG8	B	307	313	Right-handed alpha
Helix 63	AG9	B	314	326	Right-handed alpha
Helix 64	AH1	B	361	366	Right-handed alpha
Helix 65	AH2	B	367	372	Right-handed alpha
Helix 66	AH3	B	379	384	Right-handed 310
Helix 67	AH4	B	399	403	Right-handed 310
Helix 68	AH5	B	406	424	Right-handed alpha
Helix 69	AH6	B	477	493	Right-handed alpha
Helix 70	AH7	B	503	506	Right-handed 310
Helix 71	AH8	B	530	540	Right-handed alpha
Helix 72	AH9	B	560	564	Right-handed 310
Helix 73	AI1	B	565	578	Right-handed alpha
Helix 74	AI2	B	594	615	Right-handed alpha
Helix 75	AI3	B	619	624	Right-handed 310
Helix 76	AI4	B	661	665	Right-handed 310
Helix 77	AI5	B	694	705	Right-handed alpha
Helix 78	AI6	B	733	740	Right-handed alpha
Helix 79	AI7	B	748	758	Right-handed alpha
Helix 80	AI8	B	761	771	Right-handed alpha
Helix 81	AI9	B	775	781	Right-handed alpha
Helix 82	AJ1	B	787	795	Right-handed alpha
Helix 83	AJ2	B	801	809	Right-handed alpha
Helix 84	AJ3	B	850	858	Right-handed alpha
Helix 85	AJ4	B	891	894	Right-handed 310
Helix 86	AJ5	B	895	911	Right-handed alpha
Helix 87	AJ6	B	926	930	Right-handed 310
Helix 88	AJ7	B	932	942	Right-handed alpha
Helix 89	AJ8	B	961	969	Right-handed alpha
Helix 90	AJ9	B	969	980	Right-handed alpha
Helix 91	AK1	B	991	1008	Right-handed alpha
Helix 92	AK2	B	1015	1025	Right-handed alpha

There are 20 sheets in PDB entry 9WUK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	41	46	first strand
Strand 2	A	49	54	anti-parallel
Strand 3	A	356	360	parallel
Strand 4	A	333	338	anti-parallel
Strand 5	A	69	71	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	141	142	first strand
Strand 2	A	449	454	anti-parallel
Strand 3	A	425	428	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	342	344	first strand
Strand 2	A	348	350	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	437	439	first strand
Strand 2	A	443	445	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	497	501	first strand
Strand 2	A	468	473	parallel
Strand 3	A	514	520	parallel
Strand 4	A	549	556	parallel
Strand 5	A	581	582	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	497	501	first strand
Strand 2	A	468	473	parallel
Strand 3	A	514	520	parallel
Strand 4	A	549	556	parallel
Strand 5	A	587	590	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	629	634	first strand
Strand 2	B	712	717	anti-parallel
Strand 3	B	730	732	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	815	818	first strand
Strand 2	A	686	689	anti-parallel
Strand 3	A	864	870	anti-parallel
Strand 4	A	649	658	anti-parallel
Strand 5	A	668	674	anti-parallel
Strand 6	A	829	835	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	731	732	first strand
Strand 2	A	712	717	anti-parallel
Strand 3	B	629	634	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	838	840	first strand
Strand 2	A	847	849	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	946	951	first strand
Strand 2	A	918	924	parallel
Strand 3	A	886	889	parallel
Strand 4	A	982	988	parallel
Strand 5	A	1028	1033	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	41	45	first strand
Strand 2	B	50	54	anti-parallel
Strand 3	B	356	360	parallel
Strand 4	B	333	338	anti-parallel
Strand 5	B	69	71	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	141	142	first strand
Strand 2	B	449	454	anti-parallel
Strand 3	B	425	428	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	342	344	first strand
Strand 2	B	348	350	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	437	439	first strand
Strand 2	B	443	445	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	497	501	first strand
Strand 2	B	468	473	parallel
Strand 3	B	514	520	parallel
Strand 4	B	549	556	parallel
Strand 5	B	581	582	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	497	501	first strand
Strand 2	B	468	473	parallel
Strand 3	B	514	520	parallel
Strand 4	B	549	556	parallel
Strand 5	B	587	590	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	815	818	first strand
Strand 2	B	686	689	anti-parallel
Strand 3	B	864	870	anti-parallel
Strand 4	B	649	658	anti-parallel
Strand 5	B	667	674	anti-parallel
Strand 6	B	829	836	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	838	840	first strand
Strand 2	B	847	849	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	946	949	first strand
Strand 2	B	918	922	parallel
Strand 3	B	886	889	parallel
Strand 4	B	982	988	parallel
Strand 5	B	1028	1033	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9WUK

Analysis of interatomic Contacts of Structural Units in PDB entry:
9WUK