Analysis of interatomic Contacts of Structural Units in PDB entry:
9WUT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WUT entry

There are 2 chains in PDB entry 9WUT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLY 171PRO 567
A
 ASN 189PRO 567
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 9WUT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
204 218Right-handed alpha
Helix 2
AA2
B
231 240Right-handed alpha
Helix 3
AA3
B
301 305Right-handed alpha
Helix 4
AA4
B
310 330Right-handed alpha
Helix 5
AA5
B
390 395Right-handed alpha
Helix 6
AA6
B
408 422Right-handed alpha
Helix 7
AA7
B
440 444Right-handed 310
Helix 8
AA8
B
452 463Right-handed alpha
Helix 9
AA9
B
466 470Right-handed 310
Helix 10
AB1
B
472 486Right-handed alpha
Helix 11
AB2
B
487 492Right-handed 310
Helix 12
AB3
B
499 517Right-handed alpha
Helix 13
AB4
B
536 549Right-handed alpha
Helix 14
AB5
B
551 564Right-handed alpha
Helix 15
AB6
A
206 218Right-handed alpha
Helix 16
AB7
A
231 239Right-handed alpha
Helix 17
AB8
A
301 305Right-handed alpha
Helix 18
AB9
A
310 330Right-handed alpha
Helix 19
AC1
A
390 395Right-handed alpha
Helix 20
AC2
A
408 422Right-handed alpha
Helix 21
AC3
A
452 463Right-handed alpha
Helix 22
AC4
A
466 470Right-handed 310
Helix 23
AC5
A
472 486Right-handed alpha
Helix 24
AC6
A
487 492Right-handed 310
Helix 25
AC7
A
499 515Right-handed alpha
Helix 26
AC8
A
536 549Right-handed alpha
Helix 27
AC9
A
551 565Right-handed alpha
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There are 9 sheets in PDB entry 9WUT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
175 176first strand
Strand 2
B
194 199anti-parallel
Strand 3
B
288 294anti-parallel
Strand 4
B
253 256anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
175 176first strand
Strand 2
B
194 199anti-parallel
Strand 3
B
288 294anti-parallel
Strand 4
B
259 260anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
299 300first strand
Strand 2
B
343 345anti-parallel
Strand 3
B
355 357anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
333 334first strand
Strand 2
B
364 365anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
372 374first strand
Strand 2
B
403 405anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 200first strand
Strand 2
A
287 294anti-parallel
Strand 3
A
253 259anti-parallel
Strand 4
A
224 227parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
299 300first strand
Strand 2
A
343 346anti-parallel
Strand 3
A
354 357anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
333 334first strand
Strand 2
A
364 365anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 375first strand
Strand 2
A
402 405anti-parallel
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