Analysis of interatomic Contacts of Structural Units in PDB entry:
9WUU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WUU entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 3 chains in PDB entry 9WUU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ILE 157GLN 204
B
 ASN 206PRO 567
A
 ASN 189PRO 567
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 9WUU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
207 217Right-handed alpha
Helix 2
AA2
B
231 239Right-handed alpha
Helix 3
AA3
B
301 305Right-handed alpha
Helix 4
AA4
B
306 308Right-handed 310
Helix 5
AA5
B
310 330Right-handed alpha
Helix 6
AA6
B
385 389Right-handed 310
Helix 7
AA7
B
390 395Right-handed alpha
Helix 8
AA8
B
407 409Right-handed 310
Helix 9
AA9
B
410 422Right-handed alpha
Helix 10
AB1
B
452 463Right-handed alpha
Helix 11
AB2
B
472 486Right-handed alpha
Helix 12
AB3
B
487 492Right-handed 310
Helix 13
AB4
B
499 517Right-handed alpha
Helix 14
AB5
B
536 549Right-handed alpha
Helix 15
AB6
B
551 565Right-handed alpha
Helix 16
AB7
A
207 218Right-handed alpha
Helix 17
AB8
A
231 241Right-handed alpha
Helix 18
AB9
A
301 305Right-handed alpha
Helix 19
AC1
A
310 329Right-handed alpha
Helix 20
AC2
A
390 395Right-handed alpha
Helix 21
AC3
A
408 422Right-handed alpha
Helix 22
AC4
A
429 433Right-handed 310
Helix 23
AC5
A
440 444Right-handed 310
Helix 24
AC6
A
452 463Right-handed alpha
Helix 25
AC7
A
466 470Right-handed 310
Helix 26
AC8
A
472 483Right-handed alpha
Helix 27
AC9
A
487 492Right-handed 310
Helix 28
AD1
A
499 516Right-handed alpha
Helix 29
AD2
A
517 520Right-handed 310
Helix 30
AD3
A
536 549Right-handed alpha
Helix 31
AD4
A
551 564Right-handed alpha
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There are 6 sheets in PDB entry 9WUU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
195 199first strand
Strand 2
B
288 292anti-parallel
Strand 3
B
256 259anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
299 300first strand
Strand 2
B
343 345anti-parallel
Strand 3
B
355 357anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
372 375first strand
Strand 2
B
402 405anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 199first strand
Strand 2
A
288 295anti-parallel
Strand 3
A
253 259anti-parallel
Strand 4
A
224 226parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
299 300first strand
Strand 2
A
343 349anti-parallel
Strand 3
A
352 357anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 375first strand
Strand 2
A
402 405anti-parallel
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