Analysis of interatomic Contacts of Structural Units in PDB entry:
9WWF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WWF entry

There is 1 chain in PDB entry 9WWF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 51ASN 358
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 9WWF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
80 91Right-handed alpha
Helix 2
AA2
A
101 116Right-handed alpha
Helix 3
AA3
A
116 126Right-handed alpha
Helix 4
AA4
A
129 148Right-handed alpha
Helix 5
AA5
A
160 164Right-handed 310
Helix 6
AA6
A
165 173Right-handed alpha
Helix 7
AA7
A
184 196Right-handed alpha
Helix 8
AA8
A
206 229Right-handed alpha
Helix 9
AA9
A
238 244Right-handed alpha
Helix 10
AB1
A
244 257Right-handed alpha
Helix 11
AB2
A
261 271Right-handed 310
Helix 12
AB3
A
285 290Right-handed alpha
Helix 13
AB4
A
306 317Right-handed alpha
Helix 14
AB5
A
318 323Right-handed alpha
Helix 15
AB6
A
338 351Right-handed alpha
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There are 2 sheets in PDB entry 9WWF. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 54first strand
Strand 2
A
62 64anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 95first strand
Strand 2
A
154 158parallel
Strand 3
A
70 74parallel
Strand 4
A
177 182parallel
Strand 5
A
233 237parallel
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