Analysis of interatomic Contacts of Structural Units in PDB entry:
9WWI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WWI entry

There is 1 chain in PDB entry 9WWI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 29ILE 543
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 33 helices in PDB entry 9WWI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 47Right-handed alpha
Helix 2
AA2
A
50 64Right-handed alpha
Helix 3
AA3
A
71 84Right-handed alpha
Helix 4
AA4
A
94 108Right-handed alpha
Helix 5
AA5
A
114 118Right-handed 310
Helix 6
AA6
A
129 135Right-handed 310
Helix 7
AA7
A
136 146Right-handed alpha
Helix 8
AA8
A
147 149Right-handed 310
Helix 9
AA9
A
153 169Right-handed alpha
Helix 10
AB1
A
174 185Right-handed alpha
Helix 11
AB2
A
193 205Right-handed alpha
Helix 12
AB3
A
206 208Right-handed 310
Helix 13
AB4
A
212 245Right-handed alpha
Helix 14
AB5
A
256 266Right-handed alpha
Helix 15
AB6
A
270 272Right-handed 310
Helix 16
AB7
A
273 286Right-handed alpha
Helix 17
AB8
A
287 295Right-handed alpha
Helix 18
AB9
A
299 313Right-handed alpha
Helix 19
AC1
A
314 322Right-handed 310
Helix 20
AC2
A
323 346Right-handed alpha
Helix 21
AC3
A
350 375Right-handed alpha
Helix 22
AC4
A
381 392Right-handed alpha
Helix 23
AC5
A
395 404Right-handed alpha
Helix 24
AC6
A
410 418Right-handed alpha
Helix 25
AC7
A
421 438Right-handed alpha
Helix 26
AC8
A
439 444Right-handed alpha
Helix 27
AC9
A
450 460Right-handed alpha
Helix 28
AD1
A
462 467Right-handed alpha
Helix 29
AD2
A
470 488Right-handed alpha
Helix 30
AD3
A
489 491Right-handed 310
Helix 31
AD4
A
497 507Right-handed alpha
Helix 32
AD5
A
509 514Right-handed alpha
Helix 33
AD6
A
535 539Right-handed 310
Back to top of page

There is 1 sheet (AA1) in PDB entry 9WWI.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
515 516first strand
Strand 2
A
523 524anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il