Analysis of interatomic Contacts of Structural Units in PDB entry:
9WWU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WWU entry

There are 4 chains in PDB entry 9WWU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 TYR 403ASN 510
D
 TYR 403ASN 510
A
 MET 1ASP 278
C
 MET 1LEU 462
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 9WWU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
404 420Right-handed alpha
Helix 2
AA2
B
421 444Right-handed alpha
Helix 3
AA3
B
446 448Right-handed 310
Helix 4
AA4
B
449 462Right-handed alpha
Helix 5
AA5
B
464 473Right-handed alpha
Helix 6
AA6
B
476 507Right-handed alpha
Helix 7
AA7
D
404 420Right-handed alpha
Helix 8
AA8
D
421 443Right-handed alpha
Helix 9
AA9
D
449 462Right-handed alpha
Helix 10
AB1
D
464 473Right-handed alpha
Helix 11
AB2
D
476 507Right-handed alpha
Helix 12
AB3
A
2 24Right-handed alpha
Helix 13
AB4
A
30 50Right-handed alpha
Helix 14
AB5
A
56 78Right-handed alpha
Helix 15
AB6
A
82 108Right-handed alpha
Helix 16
AB7
A
116 143Right-handed alpha
Helix 17
AB8
A
159 180Right-handed alpha
Helix 18
AB9
A
183 202Right-handed alpha
Helix 19
AC1
A
216 237Right-handed alpha
Helix 20
AC2
A
238 263Right-handed alpha
Helix 21
AC3
A
266 271Right-handed alpha
Helix 22
AC4
C
2 24Right-handed alpha
Helix 23
AC5
C
30 50Right-handed alpha
Helix 24
AC6
C
56 77Right-handed alpha
Helix 25
AC7
C
82 108Right-handed alpha
Helix 26
AC8
C
114 147Right-handed alpha
Helix 27
AC9
C
159 180Right-handed alpha
Helix 28
AD1
C
183 209Right-handed alpha
Helix 29
AD2
C
213 237Right-handed alpha
Helix 30
AD3
C
238 263Right-handed alpha
Helix 31
AD4
C
266 272Right-handed alpha
Helix 32
AD5
C
297 305Right-handed alpha
Helix 33
AD6
C
314 320Right-handed alpha
Helix 34
AD7
C
322 337Right-handed alpha
Helix 35
AD8
C
353 362Right-handed alpha
Helix 36
AD9
C
371 377Right-handed alpha
Helix 37
AE1
C
378 381Right-handed 310
Helix 38
AE2
C
395 400Right-handed 310
Helix 39
AE3
C
413 417Right-handed 310
Helix 40
AE4
C
436 440Right-handed 310
Helix 41
AE5
C
452 462Right-handed alpha
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There are 2 sheets in PDB entry 9WWU. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
312 313first strand
Strand 2
C
387 388parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
342 343first strand
Strand 2
C
369 370parallel
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