Analysis of interatomic Contacts of Structural Units in PDB entry:
9WWV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WWV entry

There are 2 chains in PDB entry 9WWV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 MET 1001VAL 1375
F
 HIS 999GLN 1374
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 9WWV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
E
1019 1031Right-handed alpha
Helix 2
AA2
E
1040 1044Right-handed 310
Helix 3
AA3
E
1046 1053Right-handed alpha
Helix 4
AA4
E
1060 1065Right-handed 310
Helix 5
AA5
E
1076 1083Right-handed alpha
Helix 6
AA6
E
1098 1108Right-handed alpha
Helix 7
AA7
E
1122 1126Right-handed 310
Helix 8
AA8
E
1128 1144Right-handed alpha
Helix 9
AA9
E
1176 1187Right-handed alpha
Helix 10
AB1
E
1202 1206Right-handed 310
Helix 11
AB2
E
1225 1231Right-handed alpha
Helix 12
AB3
E
1231 1242Right-handed alpha
Helix 13
AB4
E
1244 1249Right-handed alpha
Helix 14
AB5
E
1270 1274Right-handed 310
Helix 15
AB6
E
1315 1318Right-handed 310
Helix 16
AB7
E
1319 1324Right-handed alpha
Helix 17
AB8
E
1324 1339Right-handed alpha
Helix 18
AB9
F
1019 1030Right-handed alpha
Helix 19
AC1
F
1048 1053Right-handed alpha
Helix 20
AC2
F
1062 1066Right-handed 310
Helix 21
AC3
F
1076 1083Right-handed alpha
Helix 22
AC4
F
1098 1107Right-handed alpha
Helix 23
AC5
F
1121 1125Right-handed 310
Helix 24
AC6
F
1128 1133Right-handed alpha
Helix 25
AC7
F
1134 1144Right-handed alpha
Helix 26
AC8
F
1175 1180Right-handed alpha
Helix 27
AC9
F
1202 1207Right-handed alpha
Helix 28
AD1
F
1231 1245Right-handed alpha
Helix 29
AD2
F
1270 1275Right-handed alpha
Helix 30
AD3
F
1314 1319Right-handed 310
Helix 31
AD4
F
1324 1340Right-handed alpha
Helix 32
AD5
F
1352 1359Right-handed alpha
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There are 2 sheets in PDB entry 9WWV. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1003 1004first strand
Strand 2
E
1068 1069parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1300 1301first strand
Strand 2
E
1309 1310anti-parallel
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