Analysis of interatomic Contacts of Structural Units in PDB entry:
9WXC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WXC entry

There are 3 chains in PDB entry 9WXC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 61SER 377
B
 GLN 61GLU 380
C
 GLN 62GLU 380
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 9WXC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
73 76Right-handed 310
Helix 2
AA2
A
112 114Right-handed 310
Helix 3
AA3
A
116 134Right-handed alpha
Helix 4
AA4
A
165 172Right-handed alpha
Helix 5
AA5
A
175 196Right-handed alpha
Helix 6
AA6
A
204 206Right-handed 310
Helix 7
AA7
A
242 246Right-handed 310
Helix 8
AA8
A
247 252Right-handed alpha
Helix 9
AA9
A
257 274Right-handed alpha
Helix 10
AB1
A
282 293Right-handed alpha
Helix 11
AB2
A
306 317Right-handed alpha
Helix 12
AB3
A
320 324Right-handed 310
Helix 13
AB4
A
326 332Right-handed alpha
Helix 14
AB5
A
349 377Right-handed alpha
Helix 15
AB6
B
73 76Right-handed 310
Helix 16
AB7
B
116 134Right-handed alpha
Helix 17
AB8
B
163 172Right-handed alpha
Helix 18
AB9
B
175 196Right-handed alpha
Helix 19
AC1
B
204 206Right-handed 310
Helix 20
AC2
B
242 246Right-handed 310
Helix 21
AC3
B
247 252Right-handed alpha
Helix 22
AC4
B
257 274Right-handed alpha
Helix 23
AC5
B
282 293Right-handed alpha
Helix 24
AC6
B
306 317Right-handed alpha
Helix 25
AC7
B
326 332Right-handed alpha
Helix 26
AC8
B
348 377Right-handed alpha
Helix 27
AC9
C
116 133Right-handed alpha
Helix 28
AD1
C
165 171Right-handed alpha
Helix 29
AD2
C
175 196Right-handed alpha
Helix 30
AD3
C
204 206Right-handed 310
Helix 31
AD4
C
242 246Right-handed 310
Helix 32
AD5
C
247 252Right-handed alpha
Helix 33
AD6
C
257 274Right-handed alpha
Helix 34
AD7
C
282 293Right-handed alpha
Helix 35
AD8
C
306 317Right-handed alpha
Helix 36
AD9
C
320 324Right-handed 310
Helix 37
AE1
C
326 332Right-handed alpha
Helix 38
AE2
C
349 379Right-handed alpha
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There are 9 sheets in PDB entry 9WXC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 86first strand
Strand 2
A
91 97anti-parallel
Strand 3
A
103 110anti-parallel
Strand 4
A
151 157anti-parallel
Strand 5
A
142 147anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 199first strand
Strand 2
A
228 229anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 210first strand
Strand 2
A
219 221anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 86first strand
Strand 2
B
91 97anti-parallel
Strand 3
B
103 110anti-parallel
Strand 4
B
151 157anti-parallel
Strand 5
B
142 147anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
198 199first strand
Strand 2
B
228 229anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
208 210first strand
Strand 2
B
219 221anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
78 86first strand
Strand 2
C
91 97anti-parallel
Strand 3
C
103 110anti-parallel
Strand 4
C
151 157anti-parallel
Strand 5
C
142 147anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
198 199first strand
Strand 2
C
228 229anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
208 210first strand
Strand 2
C
219 221anti-parallel
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