Analysis of interatomic Contacts of Structural Units in PDB entry:
9WY1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WY1 entry

There is 1 chain in PDB entry 9WY1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 141HIS 1861
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 75 helices in PDB entry 9WY1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
148 153Right-handed alpha
Helix 2
AA2
A
160 175Right-handed alpha
Helix 3
AA3
A
178 197Right-handed alpha
Helix 4
AA4
A
201 214Right-handed alpha
Helix 5
AA5
A
219 228Right-handed alpha
Helix 6
AA6
A
232 245Right-handed alpha
Helix 7
AA7
A
281 295Right-handed alpha
Helix 8
AA8
A
297 313Right-handed alpha
Helix 9
AA9
A
317 320Right-handed 310
Helix 10
AB1
A
321 337Right-handed alpha
Helix 11
AB2
A
351 357Right-handed alpha
Helix 12
AB3
A
358 368Right-handed alpha
Helix 13
AB4
A
389 395Right-handed alpha
Helix 14
AB5
A
402 406Right-handed 310
Helix 15
AB6
A
413 417Right-handed 310
Helix 16
AB7
A
418 422Right-handed 310
Helix 17
AB8
A
443 452Right-handed alpha
Helix 18
AB9
A
452 468Right-handed alpha
Helix 19
AC1
A
491 518Right-handed alpha
Helix 20
AC2
A
526 553Right-handed alpha
Helix 21
AC3
A
560 581Right-handed alpha
Helix 22
AC4
A
603 608Right-handed alpha
Helix 23
AC5
A
615 630Right-handed alpha
Helix 24
AC6
A
631 640Right-handed alpha
Helix 25
AC7
A
644 652Right-handed alpha
Helix 26
AC8
A
671 711Right-handed alpha
Helix 27
AC9
A
718 725Right-handed alpha
Helix 28
AD1
A
725 734Right-handed alpha
Helix 29
AD2
A
745 764Right-handed alpha
Helix 30
AD3
A
768 774Right-handed alpha
Helix 31
AD4
A
793 797Right-handed 310
Helix 32
AD5
A
813 826Right-handed alpha
Helix 33
AD6
A
856 862Right-handed alpha
Helix 34
AD7
A
871 880Right-handed alpha
Helix 35
AD8
A
880 899Right-handed alpha
Helix 36
AD9
A
933 945Right-handed alpha
Helix 37
AE1
A
949 958Right-handed alpha
Helix 38
AE2
A
958 972Right-handed alpha
Helix 39
AE3
A
972 979Right-handed alpha
Helix 40
AE4
A
982 997Right-handed alpha
Helix 41
AE5
A
1011 1025Right-handed alpha
Helix 42
AE6
A
1084 1089Right-handed alpha
Helix 43
AE7
A
1090 1093Right-handed 310
Helix 44
AE8
A
1108 1113Right-handed alpha
Helix 45
AE9
A
1114 1119Right-handed alpha
Helix 46
AF1
A
1120 1123Right-handed 310
Helix 47
AF2
A
1172 1187Right-handed alpha
Helix 48
AF3
A
1201 1206Right-handed alpha
Helix 49
AF4
A
1227 1233Right-handed alpha
Helix 50
AF5
A
1267 1271Right-handed 310
Helix 51
AF6
A
1272 1280Right-handed alpha
Helix 52
AF7
A
1283 1294Right-handed alpha
Helix 53
AF8
A
1294 1324Right-handed alpha
Helix 54
AF9
A
1348 1353Right-handed alpha
Helix 55
AG1
A
1353 1368Right-handed alpha
Helix 56
AG2
A
1370 1381Right-handed alpha
Helix 57
AG3
A
1383 1397Right-handed alpha
Helix 58
AG4
A
1437 1444Right-handed alpha
Helix 59
AG5
A
1449 1467Right-handed alpha
Helix 60
AG6
A
1473 1485Right-handed alpha
Helix 61
AG7
A
1495 1511Right-handed alpha
Helix 62
AG8
A
1521 1532Right-handed alpha
Helix 63
AG9
A
1559 1565Right-handed alpha
Helix 64
AH1
A
1565 1583Right-handed alpha
Helix 65
AH2
A
1598 1623Right-handed alpha
Helix 66
AH3
A
1624 1626Right-handed 310
Helix 67
AH4
A
1627 1635Right-handed alpha
Helix 68
AH5
A
1638 1665Right-handed alpha
Helix 69
AH6
A
1668 1695Right-handed alpha
Helix 70
AH7
A
1725 1753Right-handed alpha
Helix 71
AH8
A
1754 1759Right-handed alpha
Helix 72
AH9
A
1762 1775Right-handed alpha
Helix 73
AI1
A
1786 1817Right-handed alpha
Helix 74
AI2
A
1819 1824Right-handed 310
Helix 75
AI3
A
1828 1832Right-handed 310
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There are 3 sheets in PDB entry 9WY1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
370 373first strand
Strand 2
A
376 379anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
778 781first strand
Strand 2
A
788 791anti-parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1068 1071first strand
Strand 2
A
1046 1053anti-parallel
Strand 3
A
1029 1036anti-parallel
Strand 4
A
999 1004parallel
Strand 5
A
842 848parallel
Strand 6
A
1097 1100parallel
Strand 7
A
1198 1200anti-parallel
Strand 8
A
1148 1158anti-parallel
Strand 9
A
1235 1247parallel
Strand 10
A
1105 1106anti-parallel
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