Analysis of interatomic Contacts of Structural Units in PDB entry:
9WYF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WYF entry

There is 1 chain in PDB entry 9WYF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 350
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 9WYF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 14Right-handed 310
Helix 2
AA2
A
30 49Right-handed alpha
Helix 3
AA3
A
64 70Right-handed alpha
Helix 4
AA4
A
74 91Right-handed alpha
Helix 5
AA5
A
107 117Right-handed alpha
Helix 6
AA6
A
124 143Right-handed alpha
Helix 7
AA7
A
143 160Right-handed alpha
Helix 8
AA8
A
171 182Right-handed alpha
Helix 9
AA9
A
186 196Right-handed alpha
Helix 10
AB1
A
201 203Right-handed 310
Helix 11
AB2
A
204 238Right-handed alpha
Helix 12
AB3
A
245 255Right-handed alpha
Helix 13
AB4
A
257 284Right-handed alpha
Helix 14
AB5
A
290 312Right-handed alpha
Helix 15
AB6
A
324 334Right-handed alpha
Helix 16
AB7
A
336 341Right-handed alpha
Helix 17
AB8
A
342 347Right-handed 310
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There is 1 sheet (AA1) in PDB entry 9WYF.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 8first strand
Strand 2
A
26 28anti-parallel
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