Analysis of interatomic Contacts of Structural Units in PDB entry:
9WYG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WYG entry

There is 1 chain in PDB entry 9WYG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 488LEU 707
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 9WYG

There are 4 sheets in PDB entry 9WYG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
535 537first strand
Strand 2
A
526 529anti-parallel
Strand 3
A
567 570anti-parallel
Strand 4
A
573 587anti-parallel
Strand 5
A
592 603anti-parallel
Strand 6
A
647 657anti-parallel
Strand 7
A
540 551anti-parallel
Strand 8
A
556 557anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
535 537first strand
Strand 2
A
526 529anti-parallel
Strand 3
A
567 570anti-parallel
Strand 4
A
573 587anti-parallel
Strand 5
A
592 603anti-parallel
Strand 6
A
647 657anti-parallel
Strand 7
A
540 551anti-parallel
Strand 8
A
492 498anti-parallel
Strand 9
A
695 700anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
513 514first strand
Strand 2
A
607 614anti-parallel
Strand 3
A
636 642anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
616 617first strand
Strand 2
A
630 631anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il