Analysis of interatomic Contacts of Structural Units in PDB entry:
9WYL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WYL entry

There are 2 chains in PDB entry 9WYL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 852
B
 MET 1LEU 852
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 96 helices in PDB entry 9WYL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 3Right-handed 310
Helix 2
AA2
A
4 33Right-handed alpha
Helix 3
AA3
A
51 64Right-handed alpha
Helix 4
AA4
A
65 69Right-handed 310
Helix 5
AA5
A
82 105Right-handed alpha
Helix 6
AA6
A
107 111Right-handed 310
Helix 7
AA7
A
112 128Right-handed alpha
Helix 8
AA8
A
142 161Right-handed alpha
Helix 9
AA9
A
163 165Right-handed 310
Helix 10
AB1
A
166 173Right-handed alpha
Helix 11
AB2
A
182 202Right-handed alpha
Helix 12
AB3
A
218 222Right-handed 310
Helix 13
AB4
A
226 255Right-handed alpha
Helix 14
AB5
A
268 273Right-handed alpha
Helix 15
AB6
A
276 281Right-handed alpha
Helix 16
AB7
A
281 310Right-handed alpha
Helix 17
AB8
A
323 355Right-handed alpha
Helix 18
AB9
A
362 390Right-handed alpha
Helix 19
AC1
A
394 396Right-handed 310
Helix 20
AC2
A
397 402Right-handed alpha
Helix 21
AC3
A
412 440Right-handed alpha
Helix 22
AC4
A
445 461Right-handed alpha
Helix 23
AC5
A
462 467Right-handed 310
Helix 24
AC6
A
473 491Right-handed alpha
Helix 25
AC7
A
491 508Right-handed alpha
Helix 26
AC8
A
512 532Right-handed alpha
Helix 27
AC9
A
533 539Right-handed 310
Helix 28
AD1
A
545 565Right-handed alpha
Helix 29
AD2
A
565 576Right-handed alpha
Helix 30
AD3
A
577 579Right-handed 310
Helix 31
AD4
A
580 585Right-handed 310
Helix 32
AD5
A
586 611Right-handed alpha
Helix 33
AD6
A
613 621Right-handed alpha
Helix 34
AD7
A
624 654Right-handed alpha
Helix 35
AD8
A
660 681Right-handed alpha
Helix 36
AD9
A
682 698Right-handed alpha
Helix 37
AE1
A
698 704Right-handed alpha
Helix 38
AE2
A
704 709Right-handed alpha
Helix 39
AE3
A
710 720Right-handed alpha
Helix 40
AE4
A
720 745Right-handed alpha
Helix 41
AE5
A
748 759Right-handed alpha
Helix 42
AE6
A
761 765Right-handed 310
Helix 43
AE7
A
768 778Right-handed alpha
Helix 44
AE8
A
778 788Right-handed alpha
Helix 45
AE9
A
791 795Right-handed 310
Helix 46
AF1
A
801 827Right-handed alpha
Helix 47
AF2
A
829 848Right-handed alpha
Helix 48
AF3
A
849 852Right-handed 310
Helix 49
AF4
B
4 33Right-handed alpha
Helix 50
AF5
B
51 64Right-handed alpha
Helix 51
AF6
B
65 69Right-handed 310
Helix 52
AF7
B
82 105Right-handed alpha
Helix 53
AF8
B
107 111Right-handed 310
Helix 54
AF9
B
112 128Right-handed alpha
Helix 55
AG1
B
142 161Right-handed alpha
Helix 56
AG2
B
166 173Right-handed alpha
Helix 57
AG3
B
182 202Right-handed alpha
Helix 58
AG4
B
218 222Right-handed 310
Helix 59
AG5
B
226 255Right-handed alpha
Helix 60
AG6
B
268 273Right-handed alpha
Helix 61
AG7
B
276 281Right-handed alpha
Helix 62
AG8
B
282 310Right-handed alpha
Helix 63
AG9
B
317 321Right-handed 310
Helix 64
AH1
B
323 355Right-handed alpha
Helix 65
AH2
B
362 390Right-handed alpha
Helix 66
AH3
B
394 396Right-handed 310
Helix 67
AH4
B
397 402Right-handed alpha
Helix 68
AH5
B
412 440Right-handed alpha
Helix 69
AH6
B
445 461Right-handed alpha
Helix 70
AH7
B
462 467Right-handed 310
Helix 71
AH8
B
473 491Right-handed alpha
Helix 72
AH9
B
491 508Right-handed alpha
Helix 73
AI1
B
512 532Right-handed alpha
Helix 74
AI2
B
533 538Right-handed 310
Helix 75
AI3
B
545 565Right-handed alpha
Helix 76
AI4
B
565 576Right-handed alpha
Helix 77
AI5
B
577 579Right-handed 310
Helix 78
AI6
B
580 585Right-handed 310
Helix 79
AI7
B
586 611Right-handed alpha
Helix 80
AI8
B
613 621Right-handed alpha
Helix 81
AI9
B
624 654Right-handed alpha
Helix 82
AJ1
B
660 681Right-handed alpha
Helix 83
AJ2
B
682 698Right-handed alpha
Helix 84
AJ3
B
698 703Right-handed alpha
Helix 85
AJ4
B
704 709Right-handed alpha
Helix 86
AJ5
B
710 720Right-handed alpha
Helix 87
AJ6
B
720 744Right-handed alpha
Helix 88
AJ7
B
745 747Right-handed 310
Helix 89
AJ8
B
748 758Right-handed alpha
Helix 90
AJ9
B
759 766Right-handed alpha
Helix 91
AK1
B
768 777Right-handed alpha
Helix 92
AK2
B
778 788Right-handed alpha
Helix 93
AK3
B
791 795Right-handed 310
Helix 94
AK4
B
801 827Right-handed alpha
Helix 95
AK5
B
829 848Right-handed alpha
Helix 96
AK6
B
849 852Right-handed 310
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There are 2 sheets in PDB entry 9WYL. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 50first strand
Strand 2
A
39 42anti-parallel
Strand 3
A
138 141parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 50first strand
Strand 2
B
39 42anti-parallel
Strand 3
B
138 141parallel
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