Analysis of interatomic Contacts of Structural Units in PDB entry:
9WYX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WYX entry

There are 6 chains in PDB entry 9WYX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 437LEU 732
B
 SER 437LEU 732
C
 SER 437LEU 732
D
 SER 437LEU 732
E
 SER 437LEU 732
F
 SER 437LEU 732
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 92 helices in PDB entry 9WYX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
441 451Right-handed alpha
Helix 2
AA2
A
456 468Right-handed alpha
Helix 3
AA3
A
470 497Right-handed alpha
Helix 4
AA4
A
507 510Right-handed 310
Helix 5
AA5
A
512 531Right-handed alpha
Helix 6
AA6
A
532 534Right-handed 310
Helix 7
AA7
A
538 564Right-handed alpha
Helix 8
AA8
A
568 595Right-handed alpha
Helix 9
AA9
A
601 625Right-handed alpha
Helix 10
AB1
A
635 641Right-handed alpha
Helix 11
AB2
A
644 652Right-handed alpha
Helix 12
AB3
A
657 667Right-handed alpha
Helix 13
AB4
A
668 670Right-handed 310
Helix 14
AB5
A
675 690Right-handed alpha
Helix 15
AB6
A
690 715Right-handed alpha
Helix 16
AB7
A
720 729Right-handed alpha
Helix 17
AB8
B
441 451Right-handed alpha
Helix 18
AB9
B
456 468Right-handed alpha
Helix 19
AC1
B
470 497Right-handed alpha
Helix 20
AC2
B
507 512Right-handed alpha
Helix 21
AC3
B
512 532Right-handed alpha
Helix 22
AC4
B
538 564Right-handed alpha
Helix 23
AC5
B
568 595Right-handed alpha
Helix 24
AC6
B
602 625Right-handed alpha
Helix 25
AC7
B
635 641Right-handed alpha
Helix 26
AC8
B
644 652Right-handed alpha
Helix 27
AC9
B
656 667Right-handed alpha
Helix 28
AD1
B
668 670Right-handed 310
Helix 29
AD2
B
675 690Right-handed alpha
Helix 30
AD3
B
690 715Right-handed alpha
Helix 31
AD4
B
720 729Right-handed alpha
Helix 32
AD5
C
441 451Right-handed alpha
Helix 33
AD6
C
456 468Right-handed alpha
Helix 34
AD7
C
470 497Right-handed alpha
Helix 35
AD8
C
506 512Right-handed alpha
Helix 36
AD9
C
512 532Right-handed alpha
Helix 37
AE1
C
538 564Right-handed alpha
Helix 38
AE2
C
568 595Right-handed alpha
Helix 39
AE3
C
602 625Right-handed alpha
Helix 40
AE4
C
635 641Right-handed alpha
Helix 41
AE5
C
644 652Right-handed alpha
Helix 42
AE6
C
656 667Right-handed alpha
Helix 43
AE7
C
668 670Right-handed 310
Helix 44
AE8
C
675 690Right-handed alpha
Helix 45
AE9
C
690 715Right-handed alpha
Helix 46
AF1
C
720 730Right-handed alpha
Helix 47
AF2
D
438 451Right-handed alpha
Helix 48
AF3
D
456 468Right-handed alpha
Helix 49
AF4
D
470 497Right-handed alpha
Helix 50
AF5
D
507 510Right-handed 310
Helix 51
AF6
D
512 532Right-handed alpha
Helix 52
AF7
D
538 564Right-handed alpha
Helix 53
AF8
D
568 595Right-handed alpha
Helix 54
AF9
D
601 625Right-handed alpha
Helix 55
AG1
D
635 641Right-handed alpha
Helix 56
AG2
D
644 652Right-handed alpha
Helix 57
AG3
D
657 667Right-handed alpha
Helix 58
AG4
D
668 670Right-handed 310
Helix 59
AG5
D
675 690Right-handed alpha
Helix 60
AG6
D
690 715Right-handed alpha
Helix 61
AG7
D
721 729Right-handed alpha
Helix 62
AG8
E
441 451Right-handed alpha
Helix 63
AG9
E
456 468Right-handed alpha
Helix 64
AH1
E
470 497Right-handed alpha
Helix 65
AH2
E
507 510Right-handed 310
Helix 66
AH3
E
512 531Right-handed alpha
Helix 67
AH4
E
532 534Right-handed 310
Helix 68
AH5
E
538 564Right-handed alpha
Helix 69
AH6
E
568 595Right-handed alpha
Helix 70
AH7
E
601 625Right-handed alpha
Helix 71
AH8
E
635 641Right-handed alpha
Helix 72
AH9
E
644 652Right-handed alpha
Helix 73
AI1
E
657 667Right-handed alpha
Helix 74
AI2
E
668 670Right-handed 310
Helix 75
AI3
E
675 690Right-handed alpha
Helix 76
AI4
E
690 715Right-handed alpha
Helix 77
AI5
E
720 729Right-handed alpha
Helix 78
AI6
F
441 451Right-handed alpha
Helix 79
AI7
F
456 468Right-handed alpha
Helix 80
AI8
F
470 497Right-handed alpha
Helix 81
AI9
F
506 511Right-handed alpha
Helix 82
AJ1
F
512 532Right-handed alpha
Helix 83
AJ2
F
538 564Right-handed alpha
Helix 84
AJ3
F
568 595Right-handed alpha
Helix 85
AJ4
F
602 625Right-handed alpha
Helix 86
AJ5
F
635 641Right-handed alpha
Helix 87
AJ6
F
644 652Right-handed alpha
Helix 88
AJ7
F
657 667Right-handed alpha
Helix 89
AJ8
F
668 670Right-handed 310
Helix 90
AJ9
F
675 690Right-handed alpha
Helix 91
AK1
F
690 715Right-handed alpha
Helix 92
AK2
F
720 731Right-handed alpha
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There are 6 sheets in PDB entry 9WYX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
500 501first strand
Strand 2
A
504 505anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
500 501first strand
Strand 2
B
504 505anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
500 501first strand
Strand 2
C
504 505anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
500 501first strand
Strand 2
D
504 505anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
500 501first strand
Strand 2
E
504 505anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
500 501first strand
Strand 2
F
504 505anti-parallel
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