Analysis of interatomic Contacts of Structural Units in PDB entry:
9WZE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9WZE entry

There are 7 chains in PDB entry 9WZE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 2	VAL 344
B	ALA 2	LYS 343
C	ALA 2	LYS 343
D	ALA 2	LYS 343
E	ALA 2	LYS 343
F	ALA 2	LYS 343
G	ALA 2	LYS 343

There are 51 helices in PDB entry 9WZE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	79	84	Right-handed alpha
Helix 2	AA2	A	108	114	Right-handed alpha
Helix 3	AA3	A	118	147	Right-handed alpha
Helix 4	AA4	A	149	153	Right-handed 310
Helix 5	AA5	A	172	175	Right-handed 310
Helix 6	AA6	A	176	198	Right-handed alpha
Helix 7	AA7	A	210	221	Right-handed alpha
Helix 8	AA8	A	333	335	Right-handed 310
Helix 9	AA9	B	79	84	Right-handed alpha
Helix 10	AB1	B	108	114	Right-handed alpha
Helix 11	AB2	B	118	147	Right-handed alpha
Helix 12	AB3	B	176	198	Right-handed alpha
Helix 13	AB4	B	210	221	Right-handed alpha
Helix 14	AB5	B	333	335	Right-handed 310
Helix 15	AB6	C	108	114	Right-handed alpha
Helix 16	AB7	C	118	147	Right-handed alpha
Helix 17	AB8	C	149	153	Right-handed 310
Helix 18	AB9	C	170	174	Right-handed 310
Helix 19	AC1	C	176	198	Right-handed alpha
Helix 20	AC2	C	210	222	Right-handed alpha
Helix 21	AC3	C	314	316	Right-handed 310
Helix 22	AC4	C	333	335	Right-handed 310
Helix 23	AC5	D	79	84	Right-handed 310
Helix 24	AC6	D	108	114	Right-handed alpha
Helix 25	AC7	D	118	147	Right-handed alpha
Helix 26	AC8	D	149	153	Right-handed 310
Helix 27	AC9	D	172	175	Right-handed 310
Helix 28	AD1	D	176	198	Right-handed alpha
Helix 29	AD2	D	210	222	Right-handed alpha
Helix 30	AD3	D	314	316	Right-handed 310
Helix 31	AD4	D	333	335	Right-handed 310
Helix 32	AD5	E	79	84	Right-handed alpha
Helix 33	AD6	E	108	114	Right-handed alpha
Helix 34	AD7	E	118	147	Right-handed alpha
Helix 35	AD8	E	149	153	Right-handed 310
Helix 36	AD9	E	176	198	Right-handed alpha
Helix 37	AE1	E	210	221	Right-handed alpha
Helix 38	AE2	E	314	316	Right-handed 310
Helix 39	AE3	F	79	84	Right-handed alpha
Helix 40	AE4	F	108	114	Right-handed alpha
Helix 41	AE5	F	118	147	Right-handed alpha
Helix 42	AE6	F	149	153	Right-handed 310
Helix 43	AE7	F	176	198	Right-handed alpha
Helix 44	AE8	F	210	221	Right-handed alpha
Helix 45	AE9	F	277	281	Right-handed 310
Helix 46	AF1	F	333	335	Right-handed 310
Helix 47	AF2	G	108	114	Right-handed alpha
Helix 48	AF3	G	117	148	Right-handed alpha
Helix 49	AF4	G	177	198	Right-handed alpha
Helix 50	AF5	G	210	222	Right-handed alpha
Helix 51	AF6	G	333	335	Right-handed 310

There are 29 sheets in PDB entry 9WZE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	30	32	first strand
Strand 2	B	60	66	parallel
Strand 3	B	89	95	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	51	54	first strand
Strand 2	A	298	313	parallel
Strand 3	A	318	331	anti-parallel
Strand 4	A	98	107	anti-parallel
Strand 5	B	72	73	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	89	95	first strand
Strand 2	A	60	66	anti-parallel
Strand 3	F	30	32	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	72	74	first strand
Strand 2	F	99	107	anti-parallel
Strand 3	F	318	331	anti-parallel
Strand 4	F	298	313	anti-parallel
Strand 5	F	51	54	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	163	170	first strand
Strand 2	A	337	343	parallel
Strand 3	A	288	294	anti-parallel
Strand 4	A	205	209	anti-parallel
Strand 5	A	245	249	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	232	233	first strand
Strand 2	A	238	239	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	30	32	first strand
Strand 2	C	60	66	parallel
Strand 3	C	89	95	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	51	54	first strand
Strand 2	B	298	313	parallel
Strand 3	B	318	331	anti-parallel
Strand 4	B	99	107	anti-parallel
Strand 5	C	72	74	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	163	170	first strand
Strand 2	B	337	343	parallel
Strand 3	B	288	294	anti-parallel
Strand 4	B	205	209	anti-parallel
Strand 5	B	245	249	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	232	233	first strand
Strand 2	B	238	239	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	30	32	first strand
Strand 2	D	60	66	parallel
Strand 3	D	89	95	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	51	54	first strand
Strand 2	C	298	313	parallel
Strand 3	C	318	331	anti-parallel
Strand 4	C	99	107	anti-parallel
Strand 5	D	72	73	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	163	166	first strand
Strand 2	C	337	341	parallel
Strand 3	C	288	294	anti-parallel
Strand 4	C	205	209	anti-parallel
Strand 5	C	246	249	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	232	233	first strand
Strand 2	C	238	239	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	30	32	first strand
Strand 2	E	60	66	parallel
Strand 3	D	37	38	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	30	32	first strand
Strand 2	E	60	66	parallel
Strand 3	E	89	95	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	51	54	first strand
Strand 2	D	298	313	parallel
Strand 3	D	318	331	anti-parallel
Strand 4	D	98	107	anti-parallel
Strand 5	E	72	73	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	163	170	first strand
Strand 2	D	337	343	parallel
Strand 3	D	288	294	anti-parallel
Strand 4	D	205	209	anti-parallel
Strand 5	D	246	249	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	232	233	first strand
Strand 2	D	238	239	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	30	32	first strand
Strand 2	F	60	66	parallel
Strand 3	E	37	38	parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	30	32	first strand
Strand 2	F	60	66	parallel
Strand 3	F	89	95	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	51	54	first strand
Strand 2	E	298	313	parallel
Strand 3	E	318	331	anti-parallel
Strand 4	E	99	107	anti-parallel
Strand 5	F	72	73	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	163	170	first strand
Strand 2	E	337	343	parallel
Strand 3	E	288	294	anti-parallel
Strand 4	E	205	209	anti-parallel
Strand 5	E	245	249	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	232	233	first strand
Strand 2	E	238	239	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	163	166	first strand
Strand 2	F	337	341	parallel
Strand 3	F	288	294	anti-parallel
Strand 4	F	205	209	anti-parallel
Strand 5	F	245	249	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	232	233	first strand
Strand 2	F	238	239	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	60	67	first strand
Strand 2	G	88	95	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	97	107	first strand
Strand 2	G	318	331	anti-parallel
Strand 3	G	298	313	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	164	166	first strand
Strand 2	G	337	341	parallel
Strand 3	G	288	293	anti-parallel
Strand 4	G	206	209	anti-parallel
Strand 5	G	246	249	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9WZE

Analysis of interatomic Contacts of Structural Units in PDB entry:
9WZE