Analysis of interatomic Contacts of Structural Units in PDB entry:
9WZR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9WZR entry

There are 4 chains in PDB entry 9WZR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 14ALA 594
B
 A -30 G 17
C
 C 1 C 27
D
 G -10 G 19
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 9WZR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 64Right-handed alpha
Helix 2
AA2
A
66 98Right-handed alpha
Helix 3
AA3
A
105 137Right-handed alpha
Helix 4
AA4
A
137 158Right-handed alpha
Helix 5
AA5
A
162 184Right-handed alpha
Helix 6
AA6
A
208 213Right-handed alpha
Helix 7
AA7
A
355 387Right-handed alpha
Helix 8
AA8
A
404 417Right-handed alpha
Helix 9
AA9
A
421 433Right-handed alpha
Helix 10
AB1
A
444 488Right-handed alpha
Helix 11
AB2
A
497 503Right-handed alpha
Helix 12
AB3
A
515 526Right-handed alpha
Helix 13
AB4
A
526 541Right-handed alpha
Helix 14
AB5
A
580 594Right-handed alpha
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There are 3 sheets in PDB entry 9WZR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 207first strand
Strand 2
A
269 290anti-parallel
Strand 3
A
295 313anti-parallel
Strand 4
A
15 24anti-parallel
Strand 5
A
252 260anti-parallel
Strand 6
A
230 240anti-parallel
Strand 7
A
220 227anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
349 354first strand
Strand 2
A
336 344anti-parallel
Strand 3
A
323 333anti-parallel
Strand 4
A
490 494parallel
Strand 5
A
544 548parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
563 564first strand
Strand 2
A
568 571anti-parallel
Strand 3
A
577 579anti-parallel
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