Analysis of interatomic Contacts of Structural Units in PDB entry:
9X02


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9X02 entry

There are 44 chains in PDB entry 9X02 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 5SER 194
B
 GLY 1PRO 2
B
 GLY 4PRO 5
B
 GLY 7PRO 8
B
 GLY 10TRP 11
B
 GLY 13ALA 14
B
 GLY 16PRO 17
B
 GLY 19PRO 20
C
 GLY 1PRO 2
C
 GLY 4PRO 5
C
 GLY 7PRO 8
C
 GLY 10TRP 11
C
 GLY 13ALA 14
C
 GLY 16PRO 17
C
 GLY 19PRO 20
D
 GLY 1PRO 2
D
 GLY 4PRO 5
D
 GLY 7PRO 8
D
 GLY 10TRP 11
D
 GLY 13ALA 14
D
 GLY 16PRO 17
D
 GLY 19PRO 20
E
 CYS 5SER 194
F
 GLY 1PRO 2
F
 GLY 4PRO 5
F
 GLY 7PRO 8
F
 GLY 10TRP 11
F
 GLY 13ALA 14
F
 GLY 16PRO 17
F
 GLY 19PRO 20
G
 GLY 1PRO 2
G
 GLY 4PRO 5
G
 GLY 7PRO 8
G
 GLY 10TRP 11
G
 GLY 13ALA 14
G
 GLY 16PRO 17
G
 GLY 19PRO 20
H
 GLY 1PRO 2
H
 GLY 4PRO 5
H
 GLY 7PRO 8
H
 GLY 10TRP 11
H
 GLY 13ALA 14
H
 GLY 16PRO 17
H
 GLY 19PRO 20
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 9X02. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 24Right-handed 310
Helix 2
AA2
A
25 40Right-handed alpha
Helix 3
AA3
A
70 80Right-handed alpha
Helix 4
AA4
A
90 103Right-handed alpha
Helix 5
AA5
A
130 140Right-handed alpha
Helix 6
AA6
A
153 158Right-handed alpha
Helix 7
AA7
A
159 161Right-handed 310
Helix 8
AA8
A
176 194Right-handed alpha
Helix 9
AA9
E
22 24Right-handed 310
Helix 10
AB1
E
25 39Right-handed alpha
Helix 11
AB2
E
70 80Right-handed alpha
Helix 12
AB3
E
90 103Right-handed alpha
Helix 13
AB4
E
130 140Right-handed alpha
Helix 14
AB5
E
153 158Right-handed alpha
Helix 15
AB6
E
176 194Right-handed alpha
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There are 2 sheets in PDB entry 9X02. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 63first strand
Strand 2
A
48 55anti-parallel
Strand 3
A
10 15parallel
Strand 4
A
116 122parallel
Strand 5
A
143 148parallel
Strand 6
A
168 171parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
59 63first strand
Strand 2
E
48 55anti-parallel
Strand 3
E
10 15parallel
Strand 4
E
116 122parallel
Strand 5
E
143 148parallel
Strand 6
E
168 171parallel
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