Analysis of interatomic Contacts of Structural Units in PDB entry:
9X0B

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9X0B entry

There are 4 chains in PDB entry 9X0B (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 70	LEU 516
B	SER 72	LEU 533
C	ILE 70	LEU 516
D	SER 72	LEU 533

There are 76 helices in PDB entry 9X0B. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	75	92	Right-handed alpha
Helix 2	AA2	A	94	102	Right-handed alpha
Helix 3	AA3	A	108	129	Right-handed alpha
Helix 4	AA4	A	144	155	Right-handed alpha
Helix 5	AA5	A	156	165	Right-handed alpha
Helix 6	AA6	A	182	187	Right-handed alpha
Helix 7	AA7	A	189	191	Right-handed 310
Helix 8	AA8	A	192	205	Right-handed alpha
Helix 9	AA9	A	209	239	Right-handed alpha
Helix 10	AB1	A	242	245	Right-handed 310
Helix 11	AB2	A	246	252	Right-handed alpha
Helix 12	AB3	A	259	276	Right-handed alpha
Helix 13	AB4	A	289	320	Right-handed alpha
Helix 14	AB5	A	321	337	Right-handed alpha
Helix 15	AB6	A	345	371	Right-handed alpha
Helix 16	AB7	A	375	387	Right-handed alpha
Helix 17	AB8	A	387	393	Right-handed alpha
Helix 18	AB9	A	401	411	Right-handed alpha
Helix 19	AC1	A	464	469	Right-handed alpha
Helix 20	AC2	A	491	501	Right-handed alpha
Helix 21	AC3	A	504	516	Right-handed alpha
Helix 22	AC4	B	75	102	Right-handed alpha
Helix 23	AC5	B	182	191	Right-handed 310
Helix 24	AC6	B	192	205	Right-handed alpha
Helix 25	AC7	B	209	226	Right-handed alpha
Helix 26	AC8	B	226	239	Right-handed alpha
Helix 27	AC9	B	242	251	Right-handed 310
Helix 28	AD1	B	259	276	Right-handed alpha
Helix 29	AD2	B	287	340	Right-handed alpha
Helix 30	AD3	B	343	360	Right-handed alpha
Helix 31	AD4	B	368	372	Right-handed alpha
Helix 32	AD5	B	375	388	Right-handed alpha
Helix 33	AD6	B	389	392	Right-handed 310
Helix 34	AD7	B	401	411	Right-handed alpha
Helix 35	AD8	B	464	471	Right-handed alpha
Helix 36	AD9	B	491	501	Right-handed alpha
Helix 37	AE1	B	501	514	Right-handed alpha
Helix 38	AE2	B	519	533	Right-handed alpha
Helix 39	AE3	C	75	92	Right-handed alpha
Helix 40	AE4	C	94	102	Right-handed alpha
Helix 41	AE5	C	108	129	Right-handed alpha
Helix 42	AE6	C	144	155	Right-handed alpha
Helix 43	AE7	C	156	165	Right-handed alpha
Helix 44	AE8	C	182	187	Right-handed alpha
Helix 45	AE9	C	189	191	Right-handed 310
Helix 46	AF1	C	192	205	Right-handed alpha
Helix 47	AF2	C	209	239	Right-handed alpha
Helix 48	AF3	C	246	252	Right-handed alpha
Helix 49	AF4	C	261	276	Right-handed alpha
Helix 50	AF5	C	289	320	Right-handed alpha
Helix 51	AF6	C	321	339	Right-handed alpha
Helix 52	AF7	C	345	371	Right-handed alpha
Helix 53	AF8	C	375	387	Right-handed alpha
Helix 54	AF9	C	387	393	Right-handed alpha
Helix 55	AG1	C	401	411	Right-handed alpha
Helix 56	AG2	C	464	469	Right-handed alpha
Helix 57	AG3	C	491	501	Right-handed alpha
Helix 58	AG4	C	504	516	Right-handed alpha
Helix 59	AG5	D	75	102	Right-handed alpha
Helix 60	AG6	D	182	191	Right-handed 310
Helix 61	AG7	D	192	205	Right-handed alpha
Helix 62	AG8	D	209	226	Right-handed alpha
Helix 63	AG9	D	226	239	Right-handed alpha
Helix 64	AH1	D	242	251	Right-handed 310
Helix 65	AH2	D	259	276	Right-handed alpha
Helix 66	AH3	D	287	320	Right-handed alpha
Helix 67	AH4	D	320	340	Right-handed alpha
Helix 68	AH5	D	343	360	Right-handed alpha
Helix 69	AH6	D	368	372	Right-handed alpha
Helix 70	AH7	D	375	388	Right-handed alpha
Helix 71	AH8	D	389	392	Right-handed 310
Helix 72	AH9	D	401	411	Right-handed alpha
Helix 73	AI1	D	464	471	Right-handed alpha
Helix 74	AI2	D	491	501	Right-handed alpha
Helix 75	AI3	D	501	514	Right-handed alpha
Helix 76	AI4	D	519	533	Right-handed alpha

There are 12 sheets in PDB entry 9X0B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	134	135	first strand
Strand 2	A	140	141	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	413	417	first strand
Strand 2	A	484	490	anti-parallel
Strand 3	A	432	438	anti-parallel
Strand 4	A	462	463	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	422	424	first strand
Strand 2	A	478	480	anti-parallel
Strand 3	A	441	446	anti-parallel
Strand 4	A	451	457	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	413	414	first strand
Strand 2	B	486	490	anti-parallel
Strand 3	B	432	436	anti-parallel
Strand 4	B	462	463	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	422	424	first strand
Strand 2	B	478	479	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	441	445	first strand
Strand 2	B	452	457	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	134	135	first strand
Strand 2	C	140	141	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	413	417	first strand
Strand 2	C	484	490	anti-parallel
Strand 3	C	432	438	anti-parallel
Strand 4	C	462	463	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	422	424	first strand
Strand 2	C	478	480	anti-parallel
Strand 3	C	441	446	anti-parallel
Strand 4	C	451	457	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	413	414	first strand
Strand 2	D	486	490	anti-parallel
Strand 3	D	432	436	anti-parallel
Strand 4	D	462	463	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	422	424	first strand
Strand 2	D	478	479	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	441	445	first strand
Strand 2	D	452	457	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9X0B

Analysis of interatomic Contacts of Structural Units in PDB entry:
9X0B