Analysis of interatomic Contacts of Structural Units in PDB entry:
9X0C

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9X0C entry

There are 4 chains in PDB entry 9X0C (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	ILE 70	ASP 518
C	ILE 70	ASP 518
A	ILE 70	ASP 518
D	ILE 70	ASP 518

There are 86 helices in PDB entry 9X0C. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	75	102	Right-handed alpha
Helix 2	AA2	B	107	129	Right-handed alpha
Helix 3	AA3	B	144	155	Right-handed alpha
Helix 4	AA4	B	157	165	Right-handed alpha
Helix 5	AA5	B	169	176	Right-handed 310
Helix 6	AA6	B	177	186	Right-handed alpha
Helix 7	AA7	B	187	190	Right-handed 310
Helix 8	AA8	B	191	205	Right-handed alpha
Helix 9	AA9	B	209	239	Right-handed alpha
Helix 10	AB1	B	247	252	Right-handed alpha
Helix 11	AB2	B	259	276	Right-handed alpha
Helix 12	AB3	B	287	320	Right-handed alpha
Helix 13	AB4	B	321	340	Right-handed alpha
Helix 14	AB5	B	343	360	Right-handed alpha
Helix 15	AB6	B	364	369	Right-handed alpha
Helix 16	AB7	B	375	387	Right-handed alpha
Helix 17	AB8	B	387	394	Right-handed alpha
Helix 18	AB9	B	401	411	Right-handed alpha
Helix 19	AC1	B	446	450	Right-handed 310
Helix 20	AC2	B	464	471	Right-handed alpha
Helix 21	AC3	B	491	501	Right-handed alpha
Helix 22	AC4	B	503	518	Right-handed alpha
Helix 23	AC5	C	75	102	Right-handed alpha
Helix 24	AC6	C	107	129	Right-handed alpha
Helix 25	AC7	C	144	155	Right-handed alpha
Helix 26	AC8	C	157	165	Right-handed alpha
Helix 27	AC9	C	169	176	Right-handed 310
Helix 28	AD1	C	177	186	Right-handed alpha
Helix 29	AD2	C	187	190	Right-handed 310
Helix 30	AD3	C	191	205	Right-handed alpha
Helix 31	AD4	C	210	239	Right-handed alpha
Helix 32	AD5	C	247	252	Right-handed alpha
Helix 33	AD6	C	259	276	Right-handed alpha
Helix 34	AD7	C	287	320	Right-handed alpha
Helix 35	AD8	C	321	340	Right-handed alpha
Helix 36	AD9	C	343	358	Right-handed alpha
Helix 37	AE1	C	364	369	Right-handed alpha
Helix 38	AE2	C	375	387	Right-handed alpha
Helix 39	AE3	C	387	394	Right-handed alpha
Helix 40	AE4	C	401	411	Right-handed alpha
Helix 41	AE5	C	446	450	Right-handed 310
Helix 42	AE6	C	464	471	Right-handed alpha
Helix 43	AE7	C	491	501	Right-handed alpha
Helix 44	AE8	C	503	518	Right-handed alpha
Helix 45	AE9	A	75	102	Right-handed alpha
Helix 46	AF1	A	107	129	Right-handed alpha
Helix 47	AF2	A	147	155	Right-handed alpha
Helix 48	AF3	A	157	165	Right-handed alpha
Helix 49	AF4	A	169	176	Right-handed 310
Helix 50	AF5	A	177	186	Right-handed alpha
Helix 51	AF6	A	187	190	Right-handed 310
Helix 52	AF7	A	191	205	Right-handed alpha
Helix 53	AF8	A	209	239	Right-handed alpha
Helix 54	AF9	A	247	252	Right-handed alpha
Helix 55	AG1	A	259	276	Right-handed alpha
Helix 56	AG2	A	287	320	Right-handed alpha
Helix 57	AG3	A	321	340	Right-handed alpha
Helix 58	AG4	A	343	360	Right-handed alpha
Helix 59	AG5	A	364	369	Right-handed alpha
Helix 60	AG6	A	375	387	Right-handed alpha
Helix 61	AG7	A	387	394	Right-handed alpha
Helix 62	AG8	A	401	411	Right-handed alpha
Helix 63	AG9	A	446	450	Right-handed 310
Helix 64	AH1	A	464	471	Right-handed alpha
Helix 65	AH2	A	491	501	Right-handed alpha
Helix 66	AH3	A	503	518	Right-handed alpha
Helix 67	AH4	D	75	102	Right-handed alpha
Helix 68	AH5	D	107	129	Right-handed alpha
Helix 69	AH6	D	144	155	Right-handed alpha
Helix 70	AH7	D	157	165	Right-handed alpha
Helix 71	AH8	D	169	177	Right-handed 310
Helix 72	AH9	D	178	188	Right-handed alpha
Helix 73	AI1	D	191	205	Right-handed alpha
Helix 74	AI2	D	209	239	Right-handed alpha
Helix 75	AI3	D	247	252	Right-handed alpha
Helix 76	AI4	D	259	276	Right-handed alpha
Helix 77	AI5	D	287	320	Right-handed alpha
Helix 78	AI6	D	321	340	Right-handed alpha
Helix 79	AI7	D	343	360	Right-handed alpha
Helix 80	AI8	D	364	369	Right-handed alpha
Helix 81	AI9	D	375	387	Right-handed alpha
Helix 82	AJ1	D	387	394	Right-handed alpha
Helix 83	AJ2	D	401	411	Right-handed alpha
Helix 84	AJ3	D	464	471	Right-handed alpha
Helix 85	AJ4	D	491	501	Right-handed alpha
Helix 86	AJ5	D	503	518	Right-handed alpha

There are 12 sheets in PDB entry 9X0C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	134	135	first strand
Strand 2	B	140	141	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	413	417	first strand
Strand 2	B	484	490	anti-parallel
Strand 3	B	432	436	anti-parallel
Strand 4	B	462	463	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	452	457	first strand
Strand 2	B	441	445	anti-parallel
Strand 3	B	477	480	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	134	135	first strand
Strand 2	C	140	141	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	413	417	first strand
Strand 2	C	484	490	anti-parallel
Strand 3	C	432	436	anti-parallel
Strand 4	C	462	463	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	422	424	first strand
Strand 2	C	478	480	anti-parallel
Strand 3	C	441	445	anti-parallel
Strand 4	C	452	453	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	134	135	first strand
Strand 2	A	140	141	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	413	417	first strand
Strand 2	A	477	490	anti-parallel
Strand 3	A	432	445	anti-parallel
Strand 4	A	452	457	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	422	424	first strand
Strand 2	A	477	490	anti-parallel
Strand 3	A	432	445	anti-parallel
Strand 4	A	462	463	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	134	135	first strand
Strand 2	D	140	141	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	413	417	first strand
Strand 2	D	484	490	anti-parallel
Strand 3	D	432	436	anti-parallel
Strand 4	D	462	463	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	422	424	first strand
Strand 2	D	477	480	anti-parallel
Strand 3	D	441	445	anti-parallel
Strand 4	D	452	457	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9X0C

Analysis of interatomic Contacts of Structural Units in PDB entry:
9X0C