Analysis of interatomic Contacts of Structural Units in PDB entry:
9X0E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9X0E entry

There is 1 chain in PDB entry 9X0E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 13GLY 617
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 9X0E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 35Right-handed alpha
Helix 2
AA2
A
78 81Right-handed 310
Helix 3
AA3
A
82 88Right-handed alpha
Helix 4
AA4
A
91 100Right-handed alpha
Helix 5
AA5
A
138 142Right-handed 310
Helix 6
AA6
A
153 158Right-handed 310
Helix 7
AA7
A
185 205Right-handed alpha
Helix 8
AA8
A
214 229Right-handed alpha
Helix 9
AA9
A
257 268Right-handed alpha
Helix 10
AB1
A
268 273Right-handed alpha
Helix 11
AB2
A
333 344Right-handed alpha
Helix 12
AB3
A
397 405Right-handed alpha
Helix 13
AB4
A
411 425Right-handed alpha
Helix 14
AB5
A
470 472Right-handed 310
Helix 15
AB6
A
513 532Right-handed alpha
Helix 16
AB7
A
563 567Right-handed 310
Helix 17
AB8
A
585 589Right-handed 310
Helix 18
AB9
A
597 617Right-handed alpha
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There are 8 sheets in PDB entry 9X0E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 278first strand
Strand 2
A
39 42parallel
Strand 3
A
14 19parallel
Strand 4
A
325 330parallel
Strand 5
A
581 583parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 54first strand
Strand 2
A
71 75anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
101 102first strand
Strand 2
A
147 148anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 207first strand
Strand 2
A
242 246anti-parallel
Strand 3
A
253 255anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 239first strand
Strand 2
A
440 443anti-parallel
Strand 3
A
452 456anti-parallel
Strand 4
A
474 480anti-parallel
Strand 5
A
388 395anti-parallel
Strand 6
A
535 537anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 239first strand
Strand 2
A
440 443anti-parallel
Strand 3
A
452 456anti-parallel
Strand 4
A
474 480anti-parallel
Strand 5
A
388 395anti-parallel
Strand 6
A
544 545anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
281 288first strand
Strand 2
A
299 306anti-parallel
Strand 3
A
320 323anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
490 498first strand
Strand 2
A
504 509anti-parallel
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