Analysis of interatomic Contacts of Structural Units in PDB entry:
9X0I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9X0I entry

There are 2 chains in PDB entry 9X0I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 40ILE 480
B
 SER 44ASP 483
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 9X0I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
73 76Right-handed 310
Helix 2
AA2
A
92 95Right-handed 310
Helix 3
AA3
A
121 128Right-handed alpha
Helix 4
AA4
A
129 140Right-handed alpha
Helix 5
AA5
A
144 158Right-handed alpha
Helix 6
AA6
A
162 172Right-handed alpha
Helix 7
AA7
A
177 187Right-handed alpha
Helix 8
AA8
A
188 196Right-handed 310
Helix 9
AA9
A
197 202Right-handed alpha
Helix 10
AB1
A
204 207Right-handed 310
Helix 11
AB2
A
208 235Right-handed alpha
Helix 12
AB3
A
247 258Right-handed alpha
Helix 13
AB4
A
267 282Right-handed alpha
Helix 14
AB5
A
287 298Right-handed alpha
Helix 15
AB6
A
302 316Right-handed alpha
Helix 16
AB7
A
321 334Right-handed alpha
Helix 17
AB8
A
335 337Right-handed 310
Helix 18
AB9
A
338 348Right-handed alpha
Helix 19
AC1
A
365 373Right-handed alpha
Helix 20
AC2
A
374 383Right-handed alpha
Helix 21
AC3
A
386 400Right-handed alpha
Helix 22
AC4
A
401 408Right-handed alpha
Helix 23
AC5
A
413 424Right-handed alpha
Helix 24
AC6
A
427 429Right-handed 310
Helix 25
AC7
A
430 453Right-handed alpha
Helix 26
AC8
A
475 479Right-handed 310
Helix 27
AC9
B
73 76Right-handed 310
Helix 28
AD1
B
92 95Right-handed 310
Helix 29
AD2
B
121 128Right-handed alpha
Helix 30
AD3
B
129 140Right-handed alpha
Helix 31
AD4
B
144 158Right-handed alpha
Helix 32
AD5
B
162 172Right-handed alpha
Helix 33
AD6
B
177 190Right-handed alpha
Helix 34
AD7
B
191 196Right-handed 310
Helix 35
AD8
B
197 202Right-handed alpha
Helix 36
AD9
B
204 207Right-handed 310
Helix 37
AE1
B
208 235Right-handed alpha
Helix 38
AE2
B
247 258Right-handed alpha
Helix 39
AE3
B
267 282Right-handed alpha
Helix 40
AE4
B
287 298Right-handed alpha
Helix 41
AE5
B
302 315Right-handed alpha
Helix 42
AE6
B
322 334Right-handed alpha
Helix 43
AE7
B
335 337Right-handed 310
Helix 44
AE8
B
338 348Right-handed alpha
Helix 45
AE9
B
365 383Right-handed alpha
Helix 46
AF1
B
387 401Right-handed alpha
Helix 47
AF2
B
401 407Right-handed alpha
Helix 48
AF3
B
412 415Right-handed 310
Helix 49
AF4
B
416 424Right-handed alpha
Helix 50
AF5
B
427 429Right-handed 310
Helix 51
AF6
B
430 453Right-handed alpha
Helix 52
AF7
B
475 479Right-handed 310
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There are 7 sheets in PDB entry 9X0I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 64first strand
Strand 2
A
47 53anti-parallel
Strand 3
B
47 53anti-parallel
Strand 4
B
59 64anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 71first strand
Strand 2
B
88 90parallel
Strand 3
A
97 98parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 71first strand
Strand 2
A
88 90parallel
Strand 3
B
97 98parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
101 102first strand
Strand 2
B
464 465parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 108first strand
Strand 2
A
113 116anti-parallel
Strand 3
A
119 120anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
464 465first strand
Strand 2
B
101 102parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
105 108first strand
Strand 2
B
113 116anti-parallel
Strand 3
B
119 120anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il