Analysis of interatomic Contacts of Structural Units in PDB entry:
9X1V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9X1V entry

There are 5 chains in PDB entry 9X1V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 19ASP 1711
B
 HIS 127ARG 183
C
 HIS 127THR 166
D
 HIS 127THR 166
E
 HIS 127THR 166
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 90 helices in PDB entry 9X1V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 42Right-handed alpha
Helix 2
AA2
A
45 53Right-handed alpha
Helix 3
AA3
A
61 63Right-handed 310
Helix 4
AA4
A
64 70Right-handed alpha
Helix 5
AA5
A
81 99Right-handed alpha
Helix 6
AA6
A
101 106Right-handed alpha
Helix 7
AA7
A
109 116Right-handed alpha
Helix 8
AA8
A
118 139Right-handed alpha
Helix 9
AA9
A
176 203Right-handed alpha
Helix 10
AB1
A
208 221Right-handed alpha
Helix 11
AB2
A
225 249Right-handed alpha
Helix 12
AB3
A
255 260Right-handed 310
Helix 13
AB4
A
261 266Right-handed alpha
Helix 14
AB5
A
266 280Right-handed alpha
Helix 15
AB6
A
280 290Right-handed alpha
Helix 16
AB7
A
300 314Right-handed alpha
Helix 17
AB8
A
318 346Right-handed alpha
Helix 18
AB9
A
358 368Right-handed alpha
Helix 19
AC1
A
371 376Right-handed 310
Helix 20
AC2
A
377 382Right-handed 310
Helix 21
AC3
A
397 402Right-handed alpha
Helix 22
AC4
A
410 418Right-handed 310
Helix 23
AC5
A
419 428Right-handed alpha
Helix 24
AC6
A
442 450Right-handed alpha
Helix 25
AC7
A
454 465Right-handed alpha
Helix 26
AC8
A
494 512Right-handed alpha
Helix 27
AC9
A
513 516Right-handed 310
Helix 28
AD1
A
525 542Right-handed alpha
Helix 29
AD2
A
554 558Right-handed 310
Helix 30
AD3
A
559 575Right-handed alpha
Helix 31
AD4
A
578 586Right-handed alpha
Helix 32
AD5
A
587 589Right-handed 310
Helix 33
AD6
A
627 646Right-handed alpha
Helix 34
AD7
A
670 688Right-handed alpha
Helix 35
AD8
A
720 727Right-handed alpha
Helix 36
AD9
A
738 756Right-handed alpha
Helix 37
AE1
A
761 779Right-handed alpha
Helix 38
AE2
A
780 786Right-handed alpha
Helix 39
AE3
A
786 795Right-handed alpha
Helix 40
AE4
A
797 801Right-handed 310
Helix 41
AE5
A
805 813Right-handed 310
Helix 42
AE6
A
819 835Right-handed alpha
Helix 43
AE7
A
838 847Right-handed alpha
Helix 44
AE8
A
855 862Right-handed alpha
Helix 45
AE9
A
877 889Right-handed alpha
Helix 46
AF1
A
894 900Right-handed alpha
Helix 47
AF2
A
903 916Right-handed alpha
Helix 48
AF3
A
921 931Right-handed alpha
Helix 49
AF4
A
932 947Right-handed alpha
Helix 50
AF5
A
947 957Right-handed alpha
Helix 51
AF6
A
962 979Right-handed alpha
Helix 52
AF7
A
986 991Right-handed 310
Helix 53
AF8
A
993 1007Right-handed alpha
Helix 54
AF9
A
1017 1021Right-handed alpha
Helix 55
AG1
A
1049 1053Right-handed 310
Helix 56
AG2
A
1081 1100Right-handed alpha
Helix 57
AG3
A
1104 1118Right-handed alpha
Helix 58
AG4
A
1151 1157Right-handed alpha
Helix 59
AG5
A
1178 1196Right-handed alpha
Helix 60
AG6
A
1210 1214Right-handed 310
Helix 61
AG7
A
1255 1277Right-handed alpha
Helix 62
AG8
A
1291 1295Right-handed 310
Helix 63
AG9
A
1296 1303Right-handed alpha
Helix 64
AH1
A
1304 1320Right-handed alpha
Helix 65
AH2
A
1322 1335Right-handed alpha
Helix 66
AH3
A
1338 1348Right-handed alpha
Helix 67
AH4
A
1350 1356Right-handed alpha
Helix 68
AH5
A
1359 1367Right-handed alpha
Helix 69
AH6
A
1371 1382Right-handed alpha
Helix 70
AH7
A
1383 1385Right-handed 310
Helix 71
AH8
A
1386 1395Right-handed alpha
Helix 72
AH9
A
1396 1397Right-handed 310
Helix 73
AI1
A
1398 1404Right-handed 310
Helix 74
AI2
A
1405 1407Right-handed 310
Helix 75
AI3
A
1408 1416Right-handed alpha
Helix 76
AI4
A
1447 1465Right-handed alpha
Helix 77
AI5
A
1476 1485Right-handed alpha
Helix 78
AI6
A
1499 1509Right-handed alpha
Helix 79
AI7
A
1512 1517Right-handed alpha
Helix 80
AI8
A
1519 1525Right-handed alpha
Helix 81
AI9
A
1589 1594Right-handed alpha
Helix 82
AJ1
A
1596 1616Right-handed alpha
Helix 83
AJ2
A
1622 1641Right-handed alpha
Helix 84
AJ3
A
1681 1687Right-handed alpha
Helix 85
AJ4
A
1692 1698Right-handed alpha
Helix 86
AJ5
A
1701 1709Right-handed alpha
Helix 87
AJ6
B
128 167Right-handed alpha
Helix 88
AJ7
C
128 166Right-handed alpha
Helix 89
AJ8
D
128 166Right-handed alpha
Helix 90
AJ9
E
128 166Right-handed alpha
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There are 10 sheets in PDB entry 9X1V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 60first strand
Strand 2
A
170 175parallel
Strand 3
A
162 167anti-parallel
Strand 4
A
154 159anti-parallel
Strand 5
A
149 151anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
351 353first strand
Strand 2
A
384 386anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
489 493first strand
Strand 2
A
473 478anti-parallel
Strand 3
A
591 594parallel
Strand 4
A
616 617anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
650 655first strand
Strand 2
A
658 664anti-parallel
Strand 3
A
544 550anti-parallel
Strand 4
A
699 701anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
603 604first strand
Strand 2
A
607 608anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
704 707first strand
Strand 2
A
710 713anti-parallel
Strand 3
A
716 717anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1022 1026first strand
Strand 2
A
1204 1208anti-parallel
Strand 3
A
1038 1043anti-parallel
Strand 4
A
1158 1161anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1432 1434first strand
Strand 2
A
1578 1580anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1492 1493first strand
Strand 2
A
1470 1471parallel
Strand 3
A
1533 1534parallel
Strand 4
A
1542 1547parallel
Strand 5
A
1563 1567anti-parallel
Strand 6
A
1570 1571anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1658 1662first strand
Strand 2
A
1648 1655anti-parallel
Strand 3
A
1671 1675anti-parallel
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